RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 VN1R2Q8NFZ6 395 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 PIK3R5Q8WYR1 880 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 SENP8Q96LD8 212 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 APOL5Q9BWW9 433 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 EPHX3Q9H6B9 360 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 MMRN2Q9H8L6 949 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 CD320Q9NPF0 282 aa17.41■□□□□ 0.38
SNRPB-201ENST00000381342 TIMM13Q9Y5L4 95 aaPredicted RBP17.41■□□□□ 0.38
SNRPB-201ENST00000381342 C19orf67A6NJJ6 358 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 PI4K2BG5E9Z4 385 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 SYN3O14994 580 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 PHACTR2O75167 634 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 ADH1AP07327 375 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 ODC1P11926 461 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 PNPLA4P41247 253 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 PPP3CAQ08209 521 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 KCNC3Q14003 757 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 TMEM31Q5JXX7 168 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 VARS2Q5ST30 1063 aaKnown RBP17.4■□□□□ 0.38
SNRPB-201ENST00000381342 TCERG1LQ5VWI1 586 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
SNRPB-201ENST00000381342 LNX1Q8TBB1 728 aaPredicted RBP17.4■□□□□ 0.38
SNRPB-201ENST00000381342 RPGRIP1Q96KN7 1286 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 RIPOR3Q96MK2 946 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 NECTIN4Q96NY8 510 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 KLHL5Q96PQ7 755 aa17.4■□□□□ 0.38
SNRPB-201ENST00000381342 SRRTQ9BXP5 876 aaKnown RBP17.4■□□□□ 0.38
SNRPB-201ENST00000381342 ARMCX3Q9UH62 379 aaPredicted RBP17.4■□□□□ 0.38
SNRPB-201ENST00000381342 NCOR1O75376 2440 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 KPNA7A9QM74 516 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 TEX28O15482 410 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 DCXO43602 365 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 VNN1O95497 513 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 CST3P01034 146 aaPredicted RBP17.39■□□□□ 0.37
SNRPB-201ENST00000381342 C4BPAP04003 597 aaKnown RBP17.39■□□□□ 0.37
SNRPB-201ENST00000381342 MTHFRP42898 656 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 GCLMP48507 274 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 AP3M2P53677 418 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 TYRO3Q06418 890 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 ENPEPQ07075 957 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 CBX2Q14781 532 aaPredicted RBP17.39■□□□□ 0.37
SNRPB-201ENST00000381342 ZACNQ401N2 412 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 SV2AQ7L0J3 742 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 FILIP1Q7Z7B0 1213 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 ELMO3Q96BJ8 720 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 HPDLQ96IR7 371 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 ADAM7Q9H2U9 754 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 RXFP1Q9HBX9 757 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.39■□□□□ 0.373e-10■■■□□ 15.1
SNRPB-201ENST00000381342 MTRRQ9UBK8 725 aa17.39■□□□□ 0.37
SNRPB-201ENST00000381342 R3HCC1Q9Y3T6 440 aaKnown RBP17.39■□□□□ 0.37
SNRPB-201ENST00000381342 CYB561D2O14569 222 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 IKBKBO14920 756 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 ADAM12O43184 909 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 CLSTN1O94985 981 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 ERCC5P28715 1186 aaPredicted RBP17.38■□□□□ 0.37
SNRPB-201ENST00000381342 PIK3CAP42336 1068 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 MYL6P60660 151 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 CREMQ03060 361 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 TRPC3Q13507 836 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 NCOA4Q13772 614 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 ATAT1Q5SQI0 421 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 RARS2Q5T160 578 aaKnown RBP17.38■□□□□ 0.37
SNRPB-201ENST00000381342 PDXDC1Q6P996 788 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 SYCE2Q6PIF2 218 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 RSPO2Q6UXX9 243 aaPredicted RBP17.38■□□□□ 0.37
SNRPB-201ENST00000381342 C15orf39Q6ZRI6 1047 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 ANKS3Q6ZW76 656 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 GPR65Q8IYL9 337 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 APPL2Q8NEU8 664 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 SUSD6Q92537 303 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 S1PR5Q9H228 398 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 ANO10Q9NW15 660 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 FNIP2Q9P278 1114 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 NR2E1Q9Y466 385 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 MTCL1Q9Y4B5 1905 aaKnown RBP17.38■□□□□ 0.37
SNRPB-201ENST00000381342 XIRP2A4UGR9 3374 aa17.38■□□□□ 0.37
SNRPB-201ENST00000381342 HLA-DRAP01903 254 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 EPCAMP16422 314 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 PAX3P23760 479 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 MXI1P50539 228 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 YWHAHQ04917 246 aaPredicted RBP17.37■□□□□ 0.37
SNRPB-201ENST00000381342 MYO1EQ12965 1108 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 TPD52L1Q16890 204 aaPredicted RBP17.37■□□□□ 0.37
SNRPB-201ENST00000381342 ZNF280DQ6N043 979 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 FRMD5Q7Z6J6 570 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 SLC22A17Q8WUG5 538 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 SLC35C1Q96A29 364 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 CNOT6LQ96LI5 555 aaKnown RBP17.37■□□□□ 0.37
SNRPB-201ENST00000381342 CLSTN3Q9BQT9 956 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 XYLT2Q9H1B5 865 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 DNAJC25Q9H1X3 360 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 METTL14Q9HCE5 456 aaKnown RBP17.37■□□□□ 0.37
SNRPB-201ENST00000381342 TMEM8AQ9HCN3 771 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 L1RE1Q9UN81 338 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 SNX9Q9Y5X1 595 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 CDY1Q9Y6F8 540 aa17.37■□□□□ 0.37
SNRPB-201ENST00000381342 SPTBN5Q9NRC6 3674 aaKnown RBP17.37■□□□□ 0.37
SNRPB-201ENST00000381342 VCANP13611 3396 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms