RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 COL4A2P08572 1712 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 SPTBN2O15020 2390 aa17.4■□□□□ 0.38
VCX3A-201ENST00000381089 ARNTLO00327 626 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 NRG2O14511 850 aaPredicted RBP17.39■□□□□ 0.37
VCX3A-201ENST00000381089 MAPTP10636 758 aaKnown RBP17.39■□□□□ 0.37
VCX3A-201ENST00000381089 PAX3P23760 479 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 RAD51AP2Q09MP3 1159 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 FCHO2Q0JRZ9 810 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 DUSP4Q13115 394 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 MYBPC2Q14324 1141 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 ARHGAP29Q52LW3 1261 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 OVOS1Q6IE37 1185 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 ARMCX5Q6P1M9 558 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 LONP2Q86WA8 852 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 RALGPS2Q86X27 583 aaPredicted RBP17.39■□□□□ 0.37
VCX3A-201ENST00000381089 KIF3AQ9Y496 699 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 TIMM13Q9Y5L4 95 aaPredicted RBP17.39■□□□□ 0.37
VCX3A-201ENST00000381089 MYH11P35749 1972 aa17.39■□□□□ 0.37
VCX3A-201ENST00000381089 TTC26A0AVF1 554 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 SLC38A8A6NNN8 435 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 MEFVO15553 781 aaPredicted RBP17.38■□□□□ 0.37
VCX3A-201ENST00000381089 PAPSS2O95340 614 aaPredicted RBP17.38■□□□□ 0.37
VCX3A-201ENST00000381089 OR4Q2P0C623 313 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 ODC1P11926 461 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 TYMPP19971 482 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 SCP2P22307 547 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 CDC25AP30304 524 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 AARSP49588 968 aaKnown RBP eCLIP17.38■□□□□ 0.37
VCX3A-201ENST00000381089 LIG4P49917 911 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 TOB1P50616 345 aaPredicted RBP17.38■□□□□ 0.37
VCX3A-201ENST00000381089 SPAG1Q07617 926 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 TMC8Q8IU68 726 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 ARID3BQ8IVW6 561 aaPredicted RBP17.38■□□□□ 0.37
VCX3A-201ENST00000381089 SYT2Q8N9I0 419 aaPredicted RBP17.38■□□□□ 0.37
VCX3A-201ENST00000381089 GCNAQ96QF7 691 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 ATXN3LQ9H3M9 355 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 SEMA4GQ9NTN9 838 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 OBP2AQ9NY56 170 aa17.38■□□□□ 0.37
VCX3A-201ENST00000381089 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.38■□□□□ 0.37
VCX3A-201ENST00000381089 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.37■□□□□ 0.37
VCX3A-201ENST00000381089 CHURC1-FNTBB4DL54 471 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 SPECC1L-ADORA2AF8WAN1 911 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 SLC30A4O14863 429 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 FNTBP49356 437 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 VEPH1Q14D04 833 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 PTPAQ15257 358 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 CSRP2Q16527 193 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 CEP68Q76N32 757 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 KCNK18Q7Z418 384 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 SYNPOQ8N3V7 929 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 PSMG2Q969U7 264 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 MMTAG2Q9BU76 263 aaKnown RBP17.37■□□□□ 0.37
VCX3A-201ENST00000381089 LRRC3Q9BY71 257 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 DNAJC25Q9H1X3 360 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 RPF1Q9H9Y2 349 aaKnown RBP17.37■□□□□ 0.37
VCX3A-201ENST00000381089 HSFX1Q9UBD0 423 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 EPG5Q9HCE0 2579 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 ACACBO00763 2458 aa17.37■□□□□ 0.37
VCX3A-201ENST00000381089 MYBPHLA2RUH7 354 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 MTMR11A4FU01 709 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 HNRNPDLO14979 420 aaKnown RBP17.36■□□□□ 0.37
VCX3A-201ENST00000381089 ADRB1P08588 477 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 GABRR2P28476 465 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 CTHP32929 405 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 GAS6Q14393 721 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 ZBTB6Q15916 424 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 TAF12Q16514 161 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 RILPL1Q5EBL4 403 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 HYIQ5T013 277 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 GPR158Q5T848 1215 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 CENPPQ6IPU0 288 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 PRR23CQ6ZRP0 262 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 DNAJB7Q7Z6W7 309 aaPredicted RBP17.36■□□□□ 0.37
VCX3A-201ENST00000381089 CD302Q8IX05 232 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 DDX1Q92499 740 aaKnown RBP17.36■□□□□ 0.37
VCX3A-201ENST00000381089 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.36■□□□□ 0.37
VCX3A-201ENST00000381089 RBM12Q9NTZ6 932 aaKnown RBP17.36■□□□□ 0.37
VCX3A-201ENST00000381089 THG1LQ9NWX6 298 aaKnown RBP17.36■□□□□ 0.37
VCX3A-201ENST00000381089 SLC27A5Q9Y2P5 690 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 NCANO14594 1321 aa17.36■□□□□ 0.37
VCX3A-201ENST00000381089 LACTBL1A8MY62 500 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 OGTO15294 1046 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 HRO43593 1189 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 PLA2G4BP0C869 781 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 CDC25CP30307 473 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 ABCD1P33897 745 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 SOX9P48436 509 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 TUFMP49411 452 aaKnown RBP17.35■□□□□ 0.37
VCX3A-201ENST00000381089 NCKAP1LP55160 1127 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 IL17AQ16552 155 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 PPM1JQ5JR12 505 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 HEATR6Q6AI08 1181 aaKnown RBP17.35■□□□□ 0.37
VCX3A-201ENST00000381089 RSPRY1Q96DX4 576 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 CRISPLD1Q9H336 500 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 ZMYM5Q9UJ78 669 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 DSEQ9UL01 958 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 ODF2LQ9ULJ1 636 aa17.35■□□□□ 0.37
VCX3A-201ENST00000381089 K7ESF4 209 aa17.34■□□□□ 0.37
VCX3A-201ENST00000381089 VNN2O95498 520 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms