RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ZBTB6Q15916 424 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 KNOP1Q1ED39 458 aaKnown RBP10□□□□□ -0.81
HMGN1-202ENST00000380747 SPATA1Q5VX52 437 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 PDZRN4Q6ZMN7 1036 aaPredicted RBP10□□□□□ -0.81
HMGN1-202ENST00000380747 PPFIBP1Q86W92 1011 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 BRSK2Q8IWQ3 736 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 CASP10Q92851 521 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 TIGD1Q96MW7 591 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 TSPAN18Q96SJ8 248 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 APOL5Q9BWW9 433 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 RXFP1Q9HBX9 757 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10□□□□□ -0.81
HMGN1-202ENST00000380747 CHST7Q9NS84 486 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 CLEC1BQ9P126 229 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 HOOK1Q9UJC3 728 aaKnown RBP10□□□□□ -0.81
HMGN1-202ENST00000380747 DERAQ9Y315 318 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 HCFC2Q9Y5Z7 792 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 ZNF292O60281 2723 aa10□□□□□ -0.81
HMGN1-202ENST00000380747 ATG2AQ2TAZ0 1938 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 TEX28O15482 410 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 EXOC3O60645 756 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 KIF20AO95235 890 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 SMC2O95347 1197 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 ADH1AP07327 375 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 EPCAMP16422 314 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 TKTP29401 623 aaKnown RBP9.99□□□□□ -0.81
HMGN1-202ENST00000380747 WNT7BP56706 349 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 UBE2HP62256 183 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 CREMQ03060 361 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 SIGLEC14Q08ET2 396 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 KCNB1Q14721 858 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 PSMD5Q16401 504 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 ANKRD54Q6NXT1 300 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 PDXDC1Q6P996 788 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 DSTYKQ6XUX3 929 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 PALB2Q86YC2 1186 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 CBWD2Q8IUF1 395 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 EFCAB13Q8IY85 973 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 XXYLT1Q8NBI6 393 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 ANKK1Q8NFD2 765 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 GOLGA5Q8TBA6 731 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 SLC22A17Q8WUG5 538 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 PIK3R5Q8WYR1 880 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 ERCC4Q92889 916 aaPredicted RBP9.99□□□□□ -0.81
HMGN1-202ENST00000380747 SMARCE1Q969G3 411 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 KRTAP3-2Q9BYR7 98 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 KIAA1586Q9HCI6 787 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 PDE11AQ9HCR9 933 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 RMND1Q9NWS8 449 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 PCDHGC3Q9UN70 934 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 MAPK8IP1Q9UQF2 711 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 C2CD2Q9Y426 696 aa9.99□□□□□ -0.81
HMGN1-202ENST00000380747 PROB1E7EW31 1015 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 PPEF2O14830 753 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 GFRA3O60609 400 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 GLUD1P00367 558 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 TMEM191BP0C7N4 346 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 SPATA31D3P0C874 917 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 CLCN4P51793 760 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 KCNC3Q14003 757 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 C9orf57Q5W0N0 161 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 LMBRD2Q68DH5 695 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-202ENST00000380747 TMEM184AQ6ZMB5 413 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 SPATA31D4Q6ZUB0 917 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 GPR65Q8IYL9 337 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 C12orf76Q8N812 135 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-202ENST00000380747 LNX1Q8TBB1 728 aaPredicted RBP9.98□□□□□ -0.81
HMGN1-202ENST00000380747 CACTINQ8WUQ7 758 aaKnown RBP9.98□□□□□ -0.81
HMGN1-202ENST00000380747 FAM84AQ96KN4 292 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 KCTD10Q9H3F6 313 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 DZANK1Q9NVP4 752 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 DPP3Q9NY33 737 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 FNIP2Q9P278 1114 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 CGNQ9P2M7 1197 aaKnown RBP9.98□□□□□ -0.81
HMGN1-202ENST00000380747 PCDHA5Q9Y5H7 936 aa9.98□□□□□ -0.81
HMGN1-202ENST00000380747 FRYLO94915 3013 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 PIRO00625 290 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 CALUO43852 315 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-202ENST00000380747 TNNC2P02585 160 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 NR3C1P04150 777 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 KRT19P08727 400 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 DLATP10515 647 aaKnown RBP9.97□□□□□ -0.81
HMGN1-202ENST00000380747 ARPP19P56211 112 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 SURF1Q15526 300 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 SNRNP35Q16560 246 aaKnown RBP9.97□□□□□ -0.81
HMGN1-202ENST00000380747 RARS2Q5T160 578 aaKnown RBP9.97□□□□□ -0.81
HMGN1-202ENST00000380747 ISM2Q6H9L7 571 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 SYCE2Q6PIF2 218 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 ANKS3Q6ZW76 656 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 NT5DC4Q86YG4 428 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 C12orf56Q8IXR9 622 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 SMYD4Q8IYR2 804 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-202ENST00000380747 APPL2Q8NEU8 664 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 CCDC127Q96BQ5 260 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 ASIC4Q96FT7 647 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 ANKRD36BP1Q96IX9 119 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 SUSD3Q96L08 255 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 GSDMAQ96QA5 445 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 FNBP1Q96RU3 617 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms