RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 MFN1Q8IWA4 741 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 CALML6Q8TD86 181 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 SPHKAPQ2M3C7 1700 aa16.8■□□□□ 0.28
COL2A1-202ENST00000380518 GRAP2O75791 330 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 CYP11B2P19099 503 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 COILP38432 576 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 PABPC5Q96DU9 382 aaKnown RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 IL17RAQ96F46 866 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 PIDD1Q9HB75 910 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 AGPAT3Q9NRZ7 376 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 SLC38A7Q9NVC3 462 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 GRID1Q9ULK0 1009 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 MTSS1O43312 755 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 MAN1A2O60476 641 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 ENO3P13929 434 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 GTF2H1P32780 548 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 FNTAP49354 379 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 MAP3K10Q02779 954 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 C6orf10Q5SRN2 563 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 BARGINQ6ZT62 677 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 USP33Q8TEY7 942 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 FAM49BQ9NUQ9 324 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 EIF4E1BA6NMX2 242 aaKnown RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 NDUFS3O75489 264 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 FAM107AO95990 144 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 CYBBP04839 570 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 MYL2P10916 166 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 PCSK1P29120 753 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 NPEPPSP55786 919 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 PTPAQ15257 358 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 MDH1BQ5I0G3 518 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 OTUB1Q96FW1 271 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 PPP1R36Q96LQ0 422 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 DYRK4Q9NR20 520 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 NAGPAQ9UK23 515 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 ZC3H4Q9UPT8 1303 aaKnown RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 A0A0G2JLW4 131 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 SLC29A2Q14542 456 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 PATL1Q86TB9 770 aaKnown RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 SLC13A5Q86YT5 568 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 PCYOX1LQ8NBM8 494 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 CMTM5Q96DZ9 223 aa16.79■□□□□ 0.28
COL2A1-202ENST00000380518 TARS2Q9BW92 718 aaKnown RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.79■□□□□ 0.28
COL2A1-202ENST00000380518 GTPBP10A4D1E9 387 aaKnown RBP16.78■□□□□ 0.28
COL2A1-202ENST00000380518 SLC25A27O95847 323 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 EFHC1Q5JVL4 640 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 PPIL6Q8IXY8 311 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 ELMO2Q96JJ3 720 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 FAM118BQ9BPY3 351 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL2A1-202ENST00000380518 PKD2L2Q9NZM6 624 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 SLC30A1Q9Y6M5 507 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 HBP1O60381 514 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 SUPT3HO75486 399 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 TPCN2Q8NHX9 752 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 DAB2P98082 770 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 CYTH1Q15438 398 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 SV2CQ496J9 727 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 REXO1L1PQ8IX06 675 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 TMA16Q96EY4 203 aaKnown RBP16.78■□□□□ 0.28
COL2A1-202ENST00000380518 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 GOLPH3Q9H4A6 298 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 SLC24A3Q9HC58 644 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 ZSCAN9O15535 394 aaPredicted RBP16.78■□□□□ 0.28
COL2A1-202ENST00000380518 BOLA3Q53S33 107 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 C16orf89Q6UX73 402 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 CHST13Q8NET6 341 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 C20orf96Q9NUD7 363 aaPredicted RBP16.78■□□□□ 0.28
COL2A1-202ENST00000380518 ERAP1Q9NZ08 941 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 ZBTB12Q9Y330 459 aaPredicted RBP16.78■□□□□ 0.28
COL2A1-202ENST00000380518 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
COL2A1-202ENST00000380518 CCDC78A2IDD5 438 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 PDIA6Q15084 440 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 LVRNQ6Q4G3 990 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 TAGAPQ8N103 731 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 TTC30BQ8N4P2 665 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 DNAJC7Q99615 494 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 PI4K2AQ9BTU6 479 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 CCT8L1PA6NM43 557 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 TADA2AO75478 443 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 KRT16P08779 473 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 ERFP50548 548 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 TTC39BQ5VTQ0 682 aaPredicted RBP16.77■□□□□ 0.28
COL2A1-202ENST00000380518 FBXW10Q5XX13 1052 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 KLF6Q99612 283 aaPredicted RBP16.77■□□□□ 0.28
COL2A1-202ENST00000380518 LSM7Q9UK45 103 aaKnown RBP16.77■□□□□ 0.28
COL2A1-202ENST00000380518 CDH2P19022 906 aaPredicted RBP16.77■□□□□ 0.28
COL2A1-202ENST00000380518 SEC24CP53992 1094 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 EPC2Q52LR7 807 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 ACAD10Q6JQN1 1059 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 RAB42Q8N4Z0 105 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 TEKT4Q8WW24 435 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 L2HGDHQ9H9P8 463 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 BATF3Q9NR55 127 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 TBX20Q9UMR3 447 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 CDY2AQ9Y6F7 541 aa16.77■□□□□ 0.28
COL2A1-202ENST00000380518 CDY1Q9Y6F8 540 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms