RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CDH2P19022 906 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 ARL1P40616 181 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 SLC1A1P43005 524 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 KLK7P49862 253 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 NONOQ15233 471 aaKnown RBP eCLIP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 ZNF410Q86VK4 478 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 PDSS2Q86YH6 399 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 MB21D2Q8IYB1 491 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 ACTRT1Q8TDG2 376 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 FAM89AQ96GI7 184 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 CCDC138Q96M89 665 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 METTL22Q9BUU2 404 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 EPB41L4BQ9H329 900 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 TBC1D14Q9P2M4 693 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 CCNL1Q9UK58 526 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 PCP4L1A6NKN8 68 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 SYCE1LA8MT33 242 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 A8MXQ7 604 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 RSPH10B2B2RC85 870 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 ACSL4O60488 711 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 RSPH10BP0C881 870 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 COL6A1P12109 1028 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 NR4A1P22736 598 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 AUHQ13825 339 aaKnown RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 EDRF1Q3B7T1 1238 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 ANKRD20A4Q4UJ75 823 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 CCDC62Q6P9F0 684 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 UGT2A3Q6UWM9 527 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 CCBE1Q6UXH8 406 aaPredicted RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 ZNF598Q86UK7 904 aaKnown RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 DPF3Q92784 378 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 PLEKHA8Q96JA3 519 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 FAM20AQ96MK3 541 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 FAM161BQ96MY7 647 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 CIB1Q99828 191 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 CELF4Q9BZC1 486 aaKnown RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 ZNF287Q9HBT7 754 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 DISC1Q9NRI5 854 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 RSL24D1Q9UHA3 163 aaKnown RBP9.85□□□□□ -0.83
PTPRA-204ENST00000380393 TMEM59LQ9UK28 342 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 MAP3K15Q6ZN16 1313 aa9.85□□□□□ -0.83
PTPRA-204ENST00000380393 FAM205CA6NFA0 338 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 FAM25EA8MYX2 175 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 GPAA1O43292 621 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 ITGA6P23229 1130 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 WEE1P30291 646 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 MTIF2P46199 727 aaKnown RBP9.84□□□□□ -0.83
PTPRA-204ENST00000380393 CYP2A13Q16696 494 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 SFT2D3Q587I9 215 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 CEP78Q5JTW2 689 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 APOA5Q6Q788 366 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 ARHGEF18Q6ZSZ5 1173 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 GALNT7Q86SF2 657 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 SPARTQ8N0X7 666 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 TRIML2Q8N7C3 387 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 MIGA1Q8NAN2 632 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 OXER1Q8TDS5 423 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 PAGE5Q96GU1 130 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 MAGEB18Q96M61 343 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 TMEM60Q9H2L4 133 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 KIAA1586Q9HCI6 787 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 TMOD2Q9NZR1 351 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 SRP68Q9UHB9 627 aaKnown RBP9.84□□□□□ -0.83
PTPRA-204ENST00000380393 RWDD2AQ9UIY3 292 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 KRIT1O00522 736 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 RANBP6O60518 1105 aaKnown RBP9.84□□□□□ -0.83
PTPRA-204ENST00000380393 P4HA1P13674 534 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 DNM2P50570 870 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 NUP107P57740 925 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 ZNF174Q15697 407 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 SMU1Q2TAY7 513 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 C6orf163Q5TEZ5 329 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 ZNF772Q68DY9 489 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-204ENST00000380393 TRIM22Q8IYM9 498 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 ANKRD13AQ8IZ07 590 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 HELQQ8TDG4 1101 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 ANKRD49Q8WVL7 239 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 IER2Q9BTL4 223 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 MRPS26Q9BYN8 205 aaKnown RBP9.84□□□□□ -0.83
PTPRA-204ENST00000380393 CCSER2Q9H7U1 834 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 USP40Q9NVE5 1235 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 ARHGAP20Q9P2F6 1191 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 TBK1Q9UHD2 729 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 FBXO2Q9UK22 296 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-204ENST00000380393 H7C0C1 242 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 PSMD11O00231 422 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 GABBR2O75899 941 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 PTPREP23469 700 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 ADORA1P30542 326 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 TOB1P50616 345 aaPredicted RBP9.84□□□□□ -0.83
PTPRA-204ENST00000380393 APLP1P51693 650 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 AMPD3Q01432 767 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 GBE1Q04446 702 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 IFIT5Q13325 482 aaKnown RBP9.84□□□□□ -0.83
PTPRA-204ENST00000380393 GRIK5Q16478 980 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 BTBD8Q5XKL5 378 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 ITPRIPL1Q6GPH6 555 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 DHRS4L2Q6PKH6 230 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 KIAA2013Q8IYS2 634 aa9.84□□□□□ -0.83
PTPRA-204ENST00000380393 PLBD2Q8NHP8 589 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms