RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TSPAN3O60637 253 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 LPIN1Q14693 890 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 SEZ6Q53EL9 994 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 RNF44Q7L0R7 432 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 GPD1LQ8N335 351 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 ZC3H15Q8WU90 426 aaKnown RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 TNIP3Q96KP6 325 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 ACAD9Q9H845 621 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 KIAA0232Q92628 1395 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 SH2B2O14492 632 aaPredicted RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 MYL4P12829 197 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 CPA2P48052 419 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 SERPINB10P48595 397 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 NBPF9Q3BBW0 867 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 EIF2AK1Q9BQI3 630 aaKnown RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 KIAA1586Q9HCI6 787 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 MRPL40Q9NQ50 206 aaKnown RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 IMPAD1Q9NX62 359 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 ZBTB5O15062 677 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 POU4F1Q01851 419 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 IQGAP2Q13576 1575 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 TMEM132DQ14C87 1099 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 HIST2H2ACQ16777 129 aaPredicted RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 HIST2H2AA3Q6FI13 130 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 C4orf33Q8N1A6 199 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 PIK3R5Q8WYR1 880 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 BTBD9Q96Q07 612 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 SH3GL3Q99963 347 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 PIPSLA2A3N6 862 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 NMT1P30419 496 aaKnown RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 PLA2G4AP47712 749 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 CBFBQ13951 182 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 HIC1Q14526 733 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 COA1Q9GZY4 146 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 PARVAQ9NVD7 372 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 SYNGAP1Q96PV0 1343 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 TCP11X1B4DZS4 312 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 NPTXRO95502 500 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 YWHABP31946 246 aaKnown RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 SCNN1BP51168 640 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 ZBED6P86452 979 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 HLFQ16534 295 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 EME1Q96AY2 570 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 ZNF560Q96MR9 790 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 MRPL1Q9BYD6 325 aaKnown RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 HLA-DQA2P01906 255 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 MYL2P10916 166 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 AKR1B1P15121 316 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 SRSF11Q05519 484 aaKnown RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 P3H2Q8IVL5 708 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 CYP4X1Q8N118 509 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 NSUN7Q8NE18 718 aaKnown RBP12.99□□□□□ -0.33
CHD3-203ENST00000380358 PRKAB1Q9Y478 270 aa12.99□□□□□ -0.33
CHD3-203ENST00000380358 LRRC14BA6NHZ5 514 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 PRCPP42785 496 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 STAT5BP51692 787 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 HUNKP57058 714 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 CCNIQ14094 377 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 KLHL1Q9NR64 748 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.98□□□□□ -0.33
CHD3-203ENST00000380358 PCDHGA3Q9Y5H0 932 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 PSMD12O00232 456 aaPredicted RBP12.98□□□□□ -0.33
CHD3-203ENST00000380358 LONRF1Q17RB8 773 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 ZMYM1Q5SVZ6 1142 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 GID8Q9NWU2 228 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 MOXD2PA6NHM9 499 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 NOS3P29474 1203 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 CLEC16AQ2KHT3 1053 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 P3H1Q32P28 736 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 POM121L1PQ3SYA9 428 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 PLA2G4FQ68DD2 849 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 TYW3Q6IPR3 259 aaKnown RBP12.98□□□□□ -0.33
CHD3-203ENST00000380358 ZNF512BQ96KM6 892 aaPredicted RBP12.98□□□□□ -0.33
CHD3-203ENST00000380358 ECSITQ9BQ95 431 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 MRPS26Q9BYN8 205 aaKnown RBP12.98□□□□□ -0.33
CHD3-203ENST00000380358 MIR1-1HGQ9H1L0 117 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 LOC100653049A0A140TA62 436 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 KRT34O76011 436 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 KIF23Q02241 960 aaPredicted RBP12.98□□□□□ -0.33
CHD3-203ENST00000380358 VAC14Q08AM6 782 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 MICU2Q8IYU8 434 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 CLYBLQ8N0X4 340 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 SNF8Q96H20 258 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 CHST12Q9NRB3 414 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 FBXO40Q9UH90 709 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 ATMINO43313 823 aaPredicted RBP12.98□□□□□ -0.33
CHD3-203ENST00000380358 CLASP2O75122 1294 aaKnown RBP12.98□□□□□ -0.33
CHD3-203ENST00000380358 KRT75O95678 551 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 TAF13Q15543 124 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 FAXCQ5TGI0 409 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 OXER1Q8TDS5 423 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 TRPC4APQ8TEL6 797 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 PI4K2AQ9BTU6 479 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 CAAP1Q9H8G2 361 aa12.98□□□□□ -0.33
CHD3-203ENST00000380358 UMPSP11172 480 aa12.97□□□□□ -0.33
CHD3-203ENST00000380358 TBXAS1P24557 533 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms