RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 KRT18P05783 430 aaKnown RBP25.09■■□□□ 1.61
U2AF1-202ENST00000380276 CYP3A5P20815 502 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 SDHBP21912 280 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 LMNB2Q03252 620 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 KYAT1Q16773 422 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 STXBP5Q5T5C0 1151 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 KCTD17Q8N5Z5 321 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 BEST2Q8NFU1 509 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 RASSF8Q8NHQ8 419 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 TTC8Q8TAM2 541 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 FAM200AQ8TCP9 573 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 KIF2CQ99661 725 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 DNAJC25Q9H1X3 360 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 ATXN3LQ9H3M9 355 aa25.09■■□□□ 1.61
U2AF1-202ENST00000380276 PPEF2O14830 753 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 OGTO15294 1046 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 SOAT2O75908 522 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 ODC1P11926 461 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 SOX9P48436 509 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 CDR1P51861 262 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 GPR17Q13304 367 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 ENOX2Q16206 610 aaKnown RBP25.08■■□□□ 1.61
U2AF1-202ENST00000380276 TMEM119Q4V9L6 283 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 TMC8Q8IU68 726 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 ZNF687Q8N1G0 1237 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 ATAD1Q8NBU5 361 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 CALML4Q96GE6 196 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 TMEM209Q96SK2 561 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 REEP2Q9BRK0 252 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 MSTO1Q9BUK6 570 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 ODF2LQ9ULJ1 636 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 TBX20Q9UMR3 447 aa25.08■■□□□ 1.61
U2AF1-202ENST00000380276 MTMR11A4FU01 709 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 PRR5-ARHGAP8B1AHC4 643 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 TULP1O00294 542 aaPredicted RBP25.07■■□□□ 1.6
U2AF1-202ENST00000380276 CXCL12P48061 93 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 AARSP49588 968 aaKnown RBP eCLIP25.07■■□□□ 1.6
U2AF1-202ENST00000380276 ARHGAP8P85298 464 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 SATB1Q01826 763 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 LRRC32Q14392 662 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 ZBTB6Q15916 424 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 ARHGAP15Q53QZ3 475 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 ARSHQ5FYA8 562 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 JADE1Q6IE81 842 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 TTC9BQ8N6N2 239 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 RSPRY1Q96DX4 576 aa25.07■■□□□ 1.6
U2AF1-202ENST00000380276 RBM12Q9NTZ6 932 aaKnown RBP25.07■■□□□ 1.6
U2AF1-202ENST00000380276 CHADO15335 359 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 CHRNB1P11230 501 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 TYMPP19971 482 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 GABRR2P28476 465 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 ATXN1P54253 815 aaKnown RBP25.06■■□□□ 1.6
U2AF1-202ENST00000380276 SPEM2Q0P670 501 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 MYBPC2Q14324 1141 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 GPR158Q5T848 1215 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 ERICH6BQ5W0A0 696 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 CENPPQ6IPU0 288 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 ARID3BQ8IVW6 561 aaPredicted RBP25.06■■□□□ 1.6
U2AF1-202ENST00000380276 SENP8Q96LD8 212 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 SEPT5Q99719 369 aaPredicted RBP25.06■■□□□ 1.6
U2AF1-202ENST00000380276 LRRC3Q9BY71 257 aa25.06■■□□□ 1.6
U2AF1-202ENST00000380276 GJB2P29033 226 aa25.05■■□□□ 1.6
U2AF1-202ENST00000380276 UBA7P41226 1012 aa25.05■■□□□ 1.6
U2AF1-202ENST00000380276 SPATA1Q5VX52 437 aa25.05■■□□□ 1.6
U2AF1-202ENST00000380276 ARL6IP4Q66PJ3 421 aaKnown RBP25.05■■□□□ 1.6
U2AF1-202ENST00000380276 DNAJB7Q7Z6W7 309 aaPredicted RBP25.05■■□□□ 1.6
U2AF1-202ENST00000380276 ITIH5Q86UX2 942 aa25.05■■□□□ 1.6
U2AF1-202ENST00000380276 CELF5Q8N6W0 485 aaKnown RBP25.05■■□□□ 1.6
U2AF1-202ENST00000380276 MSANTD3Q96H12 275 aa25.05■■□□□ 1.6
U2AF1-202ENST00000380276 ZFYVE19Q96K21 471 aa25.05■■□□□ 1.6
U2AF1-202ENST00000380276 C8orf33Q9H7E9 229 aaPredicted RBP25.05■■□□□ 1.6
U2AF1-202ENST00000380276 PARVGQ9HBI0 331 aa25.05■■□□□ 1.6
U2AF1-202ENST00000380276 PARD6AQ9NPB6 346 aa25.05■■□□□ 1.6
U2AF1-202ENST00000380276 ASB3Q9Y575 518 aa25.05■■□□□ 1.6
U2AF1-202ENST00000380276 FRYLO94915 3013 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 WDR87Q6ZQQ6 2873 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 CHURC1-FNTBB4DL54 471 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 ARNTLO00327 626 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 TBCAO75347 108 aaKnown RBP25.04■■□□□ 1.6
U2AF1-202ENST00000380276 NFICP08651 508 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 TDGF1P13385 188 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 FNTBP49356 437 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 LILRA4P59901 499 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 TMEM132DQ14C87 1099 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 VEPH1Q14D04 833 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 TAF12Q16514 161 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 MGAT5BQ3V5L5 792 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 HEATR6Q6AI08 1181 aaKnown RBP25.04■■□□□ 1.6
U2AF1-202ENST00000380276 PSMG2Q969U7 264 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 GCNAQ96QF7 691 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 LPIN3Q9BQK8 851 aa25.04■■□□□ 1.6
U2AF1-202ENST00000380276 CACNA1AO00555 2505 aa25.03■■□□□ 1.6
U2AF1-202ENST00000380276 TRAK2O60296 914 aa25.03■■□□□ 1.6
U2AF1-202ENST00000380276 FGF19O95750 216 aa25.03■■□□□ 1.6
U2AF1-202ENST00000380276 CYP4F8P98187 520 aa25.03■■□□□ 1.6
U2AF1-202ENST00000380276 SIM2Q14190 667 aaPredicted RBP25.03■■□□□ 1.6
U2AF1-202ENST00000380276 GAS6Q14393 721 aa25.03■■□□□ 1.6
U2AF1-202ENST00000380276 MCM6Q14566 821 aa25.03■■□□□ 1.6
U2AF1-202ENST00000380276 SLC39A12Q504Y0 691 aa25.03■■□□□ 1.6
U2AF1-202ENST00000380276 C9orf57Q5W0N0 161 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms