RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CHST7Q9NS84 486 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CHCHD3Q9NX63 227 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SLAIN2Q9P270 581 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 EXOC7Q9UPT5 735 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SCINQ9Y6U3 715 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 MEIS1O00470 390 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ATP9BO43861 1147 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SPAG6O75602 509 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SGPL1O95470 568 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 RRM1P23921 792 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ABCD1P33897 745 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 CDK7P50613 346 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 DSG1Q02413 1049 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 GCNT1Q02742 428 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SLC4A8Q2Y0W8 1093 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ODR4Q5SWX8 454 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 MAP3K21Q5TCX8 1036 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ZNF449Q6P9G9 518 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 LVRNQ6Q4G3 990 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ACAD11Q709F0 780 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 MTDHQ86UE4 582 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ZC3H18Q86VM9 953 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 TXNRD3Q86VQ6 643 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 FBXO11Q86XK2 927 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ARHGEF19Q8IW93 802 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 RBM12BQ8IXT5 1001 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 GMCL1P1Q8NEA9 526 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 GFM2Q969S9 779 aaKnown RBP8.67□□□□□ -1.02
PTPRR-203ENST00000378778 GMCL1Q96IK5 515 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 MIPEPQ99797 713 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 SPATA16Q9BXB7 569 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 MLXIPLQ9NP71 852 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 PHF24Q9UPV7 400 aa8.67□□□□□ -1.02
PTPRR-203ENST00000378778 ZNFX1Q9P2E3 1918 aaKnown RBP8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L15C9J2P7 530 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L13C9JLJ4 530 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L11C9JVI0 530 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L18D6R9N7 530 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L22D6RA61 530 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L17D6RBQ6 530 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L19D6RCP7 530 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L20D6RJB6 530 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 PSMD10O75832 226 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 SLITRK3O94933 977 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 CBX6O95503 412 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 LYNP07948 512 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 PABPC4LP0CB38 370 aaKnown RBP8.66□□□□□ -1.02
PTPRR-203ENST00000378778 DHRS4L1P0CG22 281 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 ESRRAP11474 423 aaPredicted RBP8.66□□□□□ -1.02
PTPRR-203ENST00000378778 IMPDH2P12268 514 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 GSTT1P30711 240 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 TUBP50607 506 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 POLE2P56282 527 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 KCNA1Q09470 495 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L24Q0WX57 530 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 ACSBG2Q5FVE4 666 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 USP17L6PQ6QN14 398 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 OTOP1Q7RTM1 612 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 MCOLN2Q8IZK6 566 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 ATP11CQ8NB49 1132 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 DDX1Q92499 740 aaKnown RBP8.66□□□□□ -1.02
PTPRR-203ENST00000378778 NT5C1BQ96P26 610 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 EPAS1Q99814 870 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 MANSC1Q9H8J5 431 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 TMEM8AQ9HCN3 771 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 SAYSD1Q9NPB0 183 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 KCNK4Q9NYG8 393 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 TBK1Q9UHD2 729 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 ANAPC7Q9UJX3 599 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 EFR3BQ9Y2G0 817 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 AP1G1O43747 822 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 PLS3P13797 630 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 RPA3P35244 121 aaPredicted RBP8.66□□□□□ -1.02
PTPRR-203ENST00000378778 ZNF76P36508 570 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 SF3A3Q12874 501 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTPRR-203ENST00000378778 LSAMPQ13449 338 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 LIN52Q52LA3 116 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 MYLK4Q86YV6 388 aaPredicted RBP8.66□□□□□ -1.02
PTPRR-203ENST00000378778 ALLCQ8N6M5 410 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 NKD2Q969F2 451 aaPredicted RBP8.66□□□□□ -1.02
PTPRR-203ENST00000378778 TSSK1BQ9BXA7 367 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 PCDH9Q9HC56 1237 aa8.66□□□□□ -1.02
PTPRR-203ENST00000378778 LRRC37AA6NMS7 1700 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 IGLV3-22A0A075B6J6 115 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 ARHGEF35A5YM69 484 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 H0Y3Z8 333 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 STRNO43815 780 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 TBX10O75333 385 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 ITGAVP06756 1048 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 UNGP13051 313 aaPredicted RBP8.65□□□□□ -1.02
PTPRR-203ENST00000378778 SHMT1P34896 483 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 SLC1A5Q15758 541 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 PKN2Q16513 984 aaKnown RBP8.65□□□□□ -1.02
PTPRR-203ENST00000378778 P3H1Q32P28 736 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 TMEM259Q4ZIN3 620 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 RNF220Q5VTB9 566 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 PCNX4Q63HM2 1172 aa8.65□□□□□ -1.02
PTPRR-203ENST00000378778 CIAPIN1Q6FI81 312 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms