RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 HLA-DRAP01903 254 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 FAM163BP0C2L3 166 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 RPL17P18621 184 aaKnown RBP20.14■□□□□ 0.81
SSU72-203ENST00000378725 KLRC2P26717 231 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 NDUFV1P49821 464 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 YWHAHQ04917 246 aaPredicted RBP20.14■□□□□ 0.81
SSU72-203ENST00000378725 DCAF17Q5H9S7 520 aaPredicted RBP20.14■□□□□ 0.81
SSU72-203ENST00000378725 TCERG1LQ5VWI1 586 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 SLC8B1Q6J4K2 584 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 RSPO2Q6UXX9 243 aaPredicted RBP20.14■□□□□ 0.81
SSU72-203ENST00000378725 PPFIBP1Q86W92 1011 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 TOP6BLQ8N6T0 577 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 TAS1R2Q8TE23 839 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 TAF4BQ92750 862 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 DNAJC25Q9H1X3 360 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 COQ4Q9Y3A0 265 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 SNX9Q9Y5X1 595 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 MYO9BQ13459 2157 aa20.14■□□□□ 0.81
SSU72-203ENST00000378725 PRRC2BQ5JSZ5 2229 aaKnown RBP20.13■□□□□ 0.81
SSU72-203ENST00000378725 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.13■□□□□ 0.81
SSU72-203ENST00000378725 ADAM12O43184 909 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 HUS1O60921 280 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 ADH1AP07327 375 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 MXI1P50539 228 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 CLCN4P51793 760 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 RAB33AQ14088 237 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 SOWAHAQ2M3V2 549 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 ZSCAN23Q3MJ62 389 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 CBWD6Q4V339 395 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 CBWD3Q5JTY5 395 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 CBWD5Q5RIA9 395 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 WSCD1Q658N2 575 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 OVOS1Q6IE37 1185 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 LILRA6Q6PI73 481 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 TMEM86AQ8N2M4 240 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 VN1R2Q8NFZ6 395 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 SPATA18Q8TC71 538 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 PABPC5Q96DU9 382 aaKnown RBP20.13■□□□□ 0.81
SSU72-203ENST00000378725 CNOT6LQ96LI5 555 aaKnown RBP20.13■□□□□ 0.81
SSU72-203ENST00000378725 MMRN2Q9H8L6 949 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 FBXL5Q9UKA1 691 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 L1RE1Q9UN81 338 aa20.13■□□□□ 0.81
SSU72-203ENST00000378725 LINC01565O15544 149 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 ASS1P00966 412 aaKnown RBP20.12■□□□□ 0.81
SSU72-203ENST00000378725 FMO5P49326 533 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 WDR72Q3MJ13 1102 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 ANO6Q4KMQ2 910 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 CTXN3Q4LDR2 81 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 ZNF280DQ6N043 979 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 METTL23Q86XA0 190 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 FAM114A1Q8IWE2 563 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 PDCL2Q8N4E4 241 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 FBXL13Q8NEE6 735 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 SEMA4DQ92854 862 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 BPIFA3Q9BQP9 254 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 NAT10Q9H0A0 1025 aaKnown RBP20.12■□□□□ 0.81
SSU72-203ENST00000378725 SAMSN1Q9NSI8 373 aaKnown RBP20.12■□□□□ 0.81
SSU72-203ENST00000378725 RAB20Q9NX57 234 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 NFE2L3Q9Y4A8 694 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.12■□□□□ 0.81
SSU72-203ENST00000378725 HCFC2Q9Y5Z7 792 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 CDY1Q9Y6F8 540 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 SCN1AP35498 2009 aa20.12■□□□□ 0.81
SSU72-203ENST00000378725 OR6C75A6NL08 312 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 GABRDO14764 452 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 P4HA2O15460 535 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 GLP2RO95838 553 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 OR1D2P34982 312 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 LTBRP36941 435 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 PIK3CAP42336 1068 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 MYL5Q02045 173 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 KCNH2Q12809 1159 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 ZNF699Q32M78 642 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 RTP3Q9BQQ7 232 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 VWA8A3KMH1 1905 aa20.11■□□□□ 0.81
SSU72-203ENST00000378725 TGM5O43548 720 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 N4BP1O75113 896 aaKnown RBP20.1■□□□□ 0.81
SSU72-203ENST00000378725 LRRN2O75325 713 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 TACC1O75410 805 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 RBM10P98175 930 aaKnown RBP20.1■□□□□ 0.81
SSU72-203ENST00000378725 NCAPHQ15003 741 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 SKIV2LQ15477 1246 aaKnown RBP20.1■□□□□ 0.81
SSU72-203ENST00000378725 ZNF667Q5HYK9 610 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 CDKAL1Q5VV42 579 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 PALB2Q86YC2 1186 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 GLYCTKQ8IVS8 523 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 THEM5Q8N1Q8 247 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 HDAC7Q8WUI4 952 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 FAXDC2Q96IV6 333 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 CLDND1Q9NY35 253 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 CLEC1BQ9P126 229 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 MAGEC2Q9UBF1 373 aaPredicted RBP20.1■□□□□ 0.81
SSU72-203ENST00000378725 NXF1Q9UBU9 619 aaKnown RBP20.1■□□□□ 0.81
SSU72-203ENST00000378725 COG5Q9UP83 839 aa20.1■□□□□ 0.81
SSU72-203ENST00000378725 ABLIM3O94929 683 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 GLUD1P00367 558 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 AFPP02771 609 aaKnown RBP20.09■□□□□ 0.81
SSU72-203ENST00000378725 EPCAMP16422 314 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 WARSP23381 471 aaKnown RBP20.09■□□□□ 0.81
SSU72-203ENST00000378725 LHX1P48742 406 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms