RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 C6orf118Q5T5N4 469 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 ANKRD20A3Q5VUR7 823 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 ACOT1Q86TX2 421 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 RPAINQ86UA6 219 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 N4BP2L2Q92802 583 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 PDGFCQ9NRA1 345 aa14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.97□□□□□ -0.012e-6■■■□□ 16.1
SHROOM1-203ENST00000378679 KLHL8Q9P2G9 620 aaPredicted RBP14.97□□□□□ -0.01
SHROOM1-203ENST00000378679 MOCS2O96007 188 aaPredicted RBP14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 PSMD6Q15008 389 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 COBLL1Q53SF7 1204 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 BRSK2Q8IWQ3 736 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 RCOR2Q8IZ40 523 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 BBS5Q8N3I7 341 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 PPME1Q9Y570 386 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 ADRB2P07550 413 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 ARSEP51690 589 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 PMS2P54278 862 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 SV2CQ496J9 727 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 EFHC2Q5JST6 749 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 HMGB1P1B2RPK0 211 aaPredicted RBP14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 TRAPPC3O43617 180 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 ADCY2Q08462 1091 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 IZUMO3Q5VZ72 239 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 SLC9A9Q8IVB4 645 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 ACP6Q9NPH0 428 aa14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 PRG3Q9Y2Y8 225 aaPredicted RBP14.96□□□□□ -0.01
SHROOM1-203ENST00000378679 BAZ2AQ9UIF9 1905 aaKnown RBP14.96□□□□□ -0.02
SHROOM1-203ENST00000378679 MT-ND3P03897 115 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 BEX3Q00994 111 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 BMT2Q1RMZ1 405 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 ABHD15Q6UXT9 468 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 WNK4Q96J92 1243 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 GCNT1Q02742 428 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 CD302Q8IX05 232 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 CFAP36Q96G28 342 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 SNTG2Q9NY99 539 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 KLHL14Q9P2G3 628 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 F5H423 210 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 PHF2O75151 1096 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 TADA2AO75478 443 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 UPP2O95045 317 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 TROVE2P10155 538 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 CA4P22748 312 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 RAP1GAPP47736 663 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 EIF3EP60228 445 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 CAV1Q03135 178 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 CAPSQ13938 189 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 GOLGA7BQ2TAP0 167 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 HEATR6Q6AI08 1181 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 EP400NLQ6ZTU2 488 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 GPR142Q7Z601 462 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 MMGT1Q8N4V1 131 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 LRRC8CQ8TDW0 803 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 ZNF606Q8WXB4 792 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 ACSF2Q96CM8 615 aaPredicted RBP14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 FAM84AQ96KN4 292 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 FUT8Q9BYC5 575 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 DMGDHQ9UI17 866 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 TYW5A2RUC4 315 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 GJB1P08034 283 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 PCSK1P29120 753 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 PHLDB3Q6NSJ2 640 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 JAMLQ86YT9 394 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 BAP1Q92560 729 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 LENG9Q96B70 501 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 ZSWIM1Q9BR11 485 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 POLIQ9UNA4 740 aa14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.95□□□□□ -0.02
SHROOM1-203ENST00000378679 LAMB4A4D0S4 1761 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 BTBD19C9JJ37 291 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 FARP2O94887 1054 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 SRGAP2BP0DMP2 458 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 AKR1A1P14550 325 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 KCNA2P16389 499 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 PRLRP16471 622 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 ZNF131P52739 623 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 CDH8P55286 799 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 IL9RQ01113 521 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 CACNB2Q08289 660 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 PAN2Q504Q3 1202 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 BTBD8Q5XKL5 378 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 UPF1Q92900 1129 aaKnown RBP eCLIP14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 RILPQ96NA2 401 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 MED15Q96RN5 788 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 METTL5Q9NRN9 209 aaKnown RBP14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 CRYBG1Q9Y4K1 1723 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 DUOX1Q9NRD9 1551 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 ZBBXA8MT70 800 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 ZNF862O60290 1169 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 CST8O60676 142 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 MAFO75444 373 aaPredicted RBP14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 MCF2P10911 925 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 RALAP11233 206 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 PBX1P40424 430 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 PNPLA4P41247 253 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 ROR1Q01973 937 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 SNF8Q96H20 258 aa14.94□□□□□ -0.02
SHROOM1-203ENST00000378679 C12orf42Q96LP6 360 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms