RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 SLC27A1Q6PCB7 646 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 ACOT1Q86TX2 421 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 ADGRF2Q8IZF7 708 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 ITGA11Q9UKX5 1188 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 A0A087WUV0 522 aaPredicted RBP22.31■■□□□ 1.16
SKI-201ENST00000378536 PTGER2P43116 358 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 ORC1Q13415 861 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 MYLK4Q86YV6 388 aaPredicted RBP22.31■■□□□ 1.16
SKI-201ENST00000378536 MAP4K3Q8IVH8 894 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 DCLK2Q8N568 766 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 ABI2Q9NYB9 513 aaPredicted RBP22.31■■□□□ 1.16
SKI-201ENST00000378536 ACCSLQ4AC99 568 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 IL31RAQ8NI17 732 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 TMEM169Q96HH4 297 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 TACC3Q9Y6A5 838 aa22.31■■□□□ 1.16
SKI-201ENST00000378536 A0A087X0T9 212 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 FAM228BP0C875 321 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 RAB27AP51159 221 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 AMIGO3Q86WK7 504 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 FARP1Q9Y4F1 1045 aaPredicted RBP22.3■■□□□ 1.16
SKI-201ENST00000378536 FAM237AA0A1B0GTK4 181 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 F8VZ95 297 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 USP2O75604 605 aaPredicted RBP22.3■■□□□ 1.16
SKI-201ENST00000378536 AXLP30530 894 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 MAP2K5Q13163 448 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 CCDC197Q8NCU1 140 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 PORCNQ9H237 461 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 CYP3A43Q9HB55 503 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 BCAP29Q9UHQ4 241 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 TRIM17Q9Y577 477 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 H7C4K7 107 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 ALDH1A3P47895 512 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 RUBCNQ92622 972 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 COPS5Q92905 334 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 DEFB115Q30KQ5 88 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 LRRC1Q9BTT6 524 aa22.3■■□□□ 1.16
SKI-201ENST00000378536 NCAM1P13591 858 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 BEX3Q00994 111 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 NR1H3Q13133 447 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 MDM2Q00987 491 aaPredicted RBP22.29■■□□□ 1.16
SKI-201ENST00000378536 ARHGAP18Q8N392 663 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 SLITRK1Q96PX8 696 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 RSAD1Q9HA92 442 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 SPATA31C2B4DYI2 1134 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 FGFR4P22455 802 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 DSEQ9UL01 958 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 RAP1GAPP47736 663 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 RAD51Q06609 339 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 OSBPL8Q9BZF1 889 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 AP1G2O75843 785 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 ATP11CQ8NB49 1132 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 CISHQ9NSE2 258 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 CHORDC1Q9UHD1 332 aaPredicted RBP22.29■■□□□ 1.16
SKI-201ENST00000378536 ATP11BQ9Y2G3 1177 aa22.29■■□□□ 1.16
SKI-201ENST00000378536 ZC3H4Q9UPT8 1303 aaKnown RBP22.28■■□□□ 1.16
SKI-201ENST00000378536 GOLGA8QA0A0J9YX86 632 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 GOLGA8OA6NCC3 632 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 GOLGA8NF8WBI6 632 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 COPEO14579 308 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 MX2P20592 715 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 ETNPPLQ8TBG4 499 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 DUSP9Q99956 384 aaKnown RBP22.28■■□□□ 1.16
SKI-201ENST00000378536 ZNF518BQ9C0D4 1074 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 PTGISQ16647 500 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 RASA4BC9J798 803 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 FOXP2O15409 715 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 RASA4O43374 803 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 ITGB5P18084 799 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 CCT5P48643 541 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 TPCN2Q8NHX9 752 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 RAB3IPQ96QF0 476 aaPredicted RBP22.28■■□□□ 1.16
SKI-201ENST00000378536 NOGQ13253 232 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 IL17AQ16552 155 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 YAF2Q8IY57 180 aa22.28■■□□□ 1.16
SKI-201ENST00000378536 C2CD2LO14523 706 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 FBXO47Q5MNV8 452 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 HP1BP3Q5SSJ5 553 aaPredicted RBP22.27■■□□□ 1.16
SKI-201ENST00000378536 TDRD10Q5VZ19 366 aaKnown RBP22.27■■□□□ 1.16
SKI-201ENST00000378536 ATPAF2Q8N5M1 289 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 PARD3BQ8TEW8 1205 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 WDR91A4D1P6 747 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 ARHGAP42A6NI28 874 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 EPC1Q9H2F5 836 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 ASB7Q9H672 318 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 SCG3Q8WXD2 468 aaKnown RBP22.27■■□□□ 1.16
SKI-201ENST00000378536 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.27■■□□□ 1.163e-7■□□□□ 10.2
SKI-201ENST00000378536 PPP1R11O60927 126 aaPredicted RBP22.27■■□□□ 1.16
SKI-201ENST00000378536 LHX1P48742 406 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 PPM1NQ8N819 430 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 TFR2Q9UP52 801 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 TRPV2Q9Y5S1 764 aa22.27■■□□□ 1.16
SKI-201ENST00000378536 SP3Q02447 781 aa22.27■■□□□ 1.15
SKI-201ENST00000378536 SMTNL2Q2TAL5 461 aa22.27■■□□□ 1.15
SKI-201ENST00000378536 PAN2Q504Q3 1202 aaKnown RBP22.27■■□□□ 1.15
SKI-201ENST00000378536 TMEM176AQ96HP8 235 aa22.27■■□□□ 1.15
SKI-201ENST00000378536 APBA2Q99767 749 aa22.27■■□□□ 1.15
SKI-201ENST00000378536 STK38LQ9Y2H1 464 aa22.27■■□□□ 1.15
SKI-201ENST00000378536 KLRG2A4D1S0 409 aaPredicted RBP22.26■■□□□ 1.15
SKI-201ENST00000378536 NFKBIEO00221 500 aa22.26■■□□□ 1.15
SKI-201ENST00000378536 NEMP1O14524 444 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms