RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 FGFR4P22455 802 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 MMP13P45452 471 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 RFX5P48382 616 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 TPTEP56180 551 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 KDSRQ06136 332 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 MAN2A1Q16706 1144 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 BOLA3Q53S33 107 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 LLGL2Q6P1M3 1020 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 GSTA5Q7RTV2 222 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 CCDC28AQ8IWP9 274 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 BBS5Q8N3I7 341 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 TAMM41Q96BW9 452 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 WNK4Q96J92 1243 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 KDM3AQ9Y4C1 1321 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 CPDO75976 1380 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 FAM25AB3EWG3 89 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 FAM25CB3EWG5 89 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 FAM25GB3EWG6 89 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 CLASP2O75122 1294 aaKnown RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 THOP1P52888 689 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 PLOD1Q02809 727 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 TRIM28Q13263 835 aaKnown RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 MTDHQ86UE4 582 aaKnown RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ERI1Q8IV48 349 aaKnown RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ARMC7Q9H6L4 198 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 FAM47DPA6NHR8 397 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ZBBXA8MT70 800 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 PSMD11O00231 422 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 EXOC3O60645 756 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 CDK4P11802 303 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 PSMC3P17980 439 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 VARSP26640 1264 aaKnown RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 OTUD4Q01804 1114 aaKnown RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 MTFR1Q15390 333 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 TBC1D9BQ66K14 1250 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ISLR2Q6UXK2 745 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 CENPUQ71F23 418 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 CCDC103Q8IW40 242 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 FAM20CQ8IXL6 584 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 SIX6OS1Q8N1H7 587 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 EYA3Q99504 573 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 DNM3Q9UQ16 869 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 MROH7Q68CQ1 1323 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ERVV-1B6SEH8 477 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 BTBD19C9JJ37 291 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 FAM228BP0C875 321 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 HSPA6P17066 643 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 CPA2P48052 419 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 NCKAP1LP55160 1127 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ST3GAL1Q11201 340 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 LONRF1Q17RB8 773 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 FAM26FQ5R3K3 315 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 MAPKAPK5Q8IW41 473 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 SAMD14Q8IZD0 417 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 TGFBRAP1Q8WUH2 860 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 SEPT1Q8WYJ6 367 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 MED30Q96HR3 178 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 SERPINI1Q99574 410 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ISCA1Q9BUE6 129 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 WDR6Q9NNW5 1121 aaKnown RBP12.34□□□□□ -0.43
NPHP4-202ENST00000378161 ERVK-11Q9UQG0 969 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 COMMD10Q9Y6G5 202 aa12.34□□□□□ -0.43
NPHP4-202ENST00000378161 MROH1Q8NDA8 1641 aa12.33□□□□□ -0.43
NPHP4-202ENST00000378161 CENPBD1B2RD01 187 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 H2AFZP0C0S5 128 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 TCEA1P23193 301 aaKnown RBP12.33□□□□□ -0.44
NPHP4-202ENST00000378161 ETV3P41162 512 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 SLC9A3P48764 834 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 SLC5A3P53794 718 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 HABP4Q5JVS0 413 aaKnown RBP12.33□□□□□ -0.44
NPHP4-202ENST00000378161 H2AFVQ71UI9 128 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 FASTKD5Q7L8L6 764 aaKnown RBP12.33□□□□□ -0.44
NPHP4-202ENST00000378161 AKAP14Q86UN6 197 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 EPS8L3Q8TE67 593 aaKnown RBP12.33□□□□□ -0.44
NPHP4-202ENST00000378161 KAZALD1Q96I82 304 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 SPOPO43791 374 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 SERPINB7O75635 380 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 DLGAP3O95886 979 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 MZF1P28698 734 aaPredicted RBP12.33□□□□□ -0.44
NPHP4-202ENST00000378161 PHC1P78364 1004 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 MYLK3Q32MK0 819 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 DSTYKQ6XUX3 929 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 HDAC2Q92769 488 aaKnown RBP12.33□□□□□ -0.44
NPHP4-202ENST00000378161 B3GALT6Q96L58 329 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 AIFM2Q9BRQ8 373 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 ZC3H12CQ9C0D7 883 aaKnown RBP12.33□□□□□ -0.44
NPHP4-202ENST00000378161 TBC1D14Q9P2M4 693 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 PHF2O75151 1096 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 OR6B1O95007 311 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 SCARF1Q14162 830 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 PCSK7Q16549 785 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 PERM1Q5SV97 790 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 CENPSQ8N2Z9 138 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 TRPC4APQ8TEL6 797 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 GATA6Q92908 595 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms