RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TRIM49P0CI25 452 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 TRIM49CP0CI26 452 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 CCDC192P0DO97 292 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 PPP3CAQ08209 521 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 NCOA4Q13772 614 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 RAB33AQ14088 237 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 TPD52L1Q16890 204 aaPredicted RBP14.23□□□□□ -0.13
CKAP2-202ENST00000378034 SGSM1Q2NKQ1 1148 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 CTXN3Q4LDR2 81 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 KRT39Q6A163 491 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 OVOS1Q6IE37 1185 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 SLC8B1Q6J4K2 584 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 TOP6BLQ8N6T0 577 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 MED15Q96RN5 788 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 UBE2ZQ9H832 354 aaPredicted RBP14.23□□□□□ -0.13
CKAP2-202ENST00000378034 DZANK1Q9NVP4 752 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 CLDND1Q9NY35 253 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 HCFC2Q9Y5Z7 792 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 OR6C75A6NL08 312 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 GLUD1P00367 558 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 GCLMP48507 274 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 MYL6P60660 151 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 TCERG1LQ5VWI1 586 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 SLC35C1Q96A29 364 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 XYLT2Q9H1B5 865 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 THAP9Q9H5L6 903 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 SNX9Q9Y5X1 595 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 TSC2P49815 1807 aa14.23□□□□□ -0.13
CKAP2-202ENST00000378034 SLC34A2O95436 690 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 VNN1O95497 513 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 HOXB8P17481 243 aaPredicted RBP14.22□□□□□ -0.13
CKAP2-202ENST00000378034 RPL17P18621 184 aaKnown RBP14.22□□□□□ -0.13
CKAP2-202ENST00000378034 DCAF17Q5H9S7 520 aaPredicted RBP14.22□□□□□ -0.13
CKAP2-202ENST00000378034 SCARA3Q6AZY7 606 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 LILRA6Q6PI73 481 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 LIMS2Q7Z4I7 341 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 FAM114A1Q8IWE2 563 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 THEM5Q8N1Q8 247 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 ENOX1Q8TC92 643 aaKnown RBP14.22□□□□□ -0.13
CKAP2-202ENST00000378034 PLEKHA4Q9H4M7 779 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 FBXL5Q9UKA1 691 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 MAFFQ9ULX9 164 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 TIMM13Q9Y5L4 95 aaPredicted RBP14.22□□□□□ -0.13
CKAP2-202ENST00000378034 CDY1Q9Y6F8 540 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 PMM2O15305 246 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 LINC01565O15544 149 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 N4BP1O75113 896 aaKnown RBP14.22□□□□□ -0.13
CKAP2-202ENST00000378034 GLP2RO95838 553 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 P4HA1P13674 534 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 OR1D2P34982 312 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 LTBRP36941 435 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 PIK3CAP42336 1068 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 MXI1P50539 228 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 TNNC1P63316 161 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 TYRO3Q06418 890 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 WDR72Q3MJ13 1102 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 RTL10Q7L3V2 364 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 VN1R2Q8NFZ6 395 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 IMPG2Q9BZV3 1241 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 THEGQ9P2T0 379 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 L1RE1Q9UN81 338 aa14.22□□□□□ -0.13
CKAP2-202ENST00000378034 PLXNA3P51805 1871 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 TGM5O43548 720 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 ASS1P00966 412 aaKnown RBP14.21□□□□□ -0.13
CKAP2-202ENST00000378034 HLA-DRAP01903 254 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 LHX1P48742 406 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 AAK1Q2M2I8 961 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 ZNF699Q32M78 642 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 ZNF667Q5HYK9 610 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 WSCD1Q658N2 575 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 TPGS2Q68CL5 300 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 LLGL2Q6P1M3 1020 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 RSPO2Q6UXX9 243 aaPredicted RBP14.21□□□□□ -0.13
CKAP2-202ENST00000378034 PALB2Q86YC2 1186 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 PDCL2Q8N4E4 241 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 CCDC150Q8NCX0 1101 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 FBXL13Q8NEE6 735 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 ZNF461Q8TAF7 563 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 FAXDC2Q96IV6 333 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 NAT10Q9H0A0 1025 aaKnown RBP14.21□□□□□ -0.13
CKAP2-202ENST00000378034 CLEC1BQ9P126 229 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 COQ4Q9Y3A0 265 aa14.21□□□□□ -0.13
CKAP2-202ENST00000378034 MTCL1Q9Y4B5 1905 aaKnown RBP14.21□□□□□ -0.13
CKAP2-202ENST00000378034 P4HA2O15460 535 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 TBX10O75333 385 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 TACC1O75410 805 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 EPCAMP16422 314 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 SOWAHAQ2M3V2 549 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 PUS10Q3MIT2 529 aaKnown RBP14.2□□□□□ -0.14
CKAP2-202ENST00000378034 ANKRD54Q6NXT1 300 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 EP400NLQ6ZTU2 488 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 GLYCTKQ8IVS8 523 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 TAS1R2Q8TE23 839 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 MSLNLQ96KJ4 702 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 CNOT6LQ96LI5 555 aaKnown RBP14.2□□□□□ -0.14
CKAP2-202ENST00000378034 MMRN2Q9H8L6 949 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.2□□□□□ -0.14
CKAP2-202ENST00000378034 GABRDO14764 452 aa14.2□□□□□ -0.14
CKAP2-202ENST00000378034 ADAM12O43184 909 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms