RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 AK9Q5TCS8 1911 aa14.29□□□□□ -0.12
GPC6-201ENST00000377047 USP27XA6NNY8 438 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 B3GAT3O94766 335 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 SUPT20HL2P0C7V6 817 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 RALBP11234 206 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 AGPAT5Q9NUQ2 364 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 ZDHHC9Q9Y397 364 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 PPP2R3BQ9Y5P8 575 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 GOLGA8RI6L899 631 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 DDX5P17844 614 aaKnown RBP14.28□□□□□ -0.12
GPC6-201ENST00000377047 ARFIP2P53365 341 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 GYS2P54840 703 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 PPP2R2AP63151 447 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 MAPRE1Q15691 268 aaKnown RBP14.28□□□□□ -0.12
GPC6-201ENST00000377047 MAP1SQ66K74 1059 aaPredicted RBP14.28□□□□□ -0.12
GPC6-201ENST00000377047 USP49Q70CQ1 688 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 GPR63Q9BZJ6 419 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 ALG13Q9NP73 1137 aaKnown RBP14.28□□□□□ -0.12
GPC6-201ENST00000377047 GPRC5CQ9NQ84 441 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 FBXL5Q9UKA1 691 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 PDHXO00330 501 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 HS6ST3Q8IZP7 471 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 HAUS5O94927 633 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 CYP11B2P19099 503 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 PPP3CCP48454 512 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 SH3BGRP55822 239 aaPredicted RBP14.28□□□□□ -0.12
GPC6-201ENST00000377047 DEFB128Q7Z7B8 93 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 NRBF2Q96F24 287 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 FAM118BQ9BPY3 351 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 NEUROG2Q9H2A3 272 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 PITPNM2Q9BZ72 1349 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 ORC1Q13415 861 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 LAMB3Q13751 1172 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 SYDE1Q6ZW31 735 aaPredicted RBP14.28□□□□□ -0.12
GPC6-201ENST00000377047 ADAM33Q9BZ11 813 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 PKP3Q9Y446 797 aa14.28□□□□□ -0.12
GPC6-201ENST00000377047 PRR23AA6NEV1 266 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 ZNF185O15231 689 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 ZNF286BP0CG31 522 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 GCKP35557 465 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 PDK1Q15118 436 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 PTRHD1Q6GMV3 140 aaKnown RBP14.27□□□□□ -0.12
GPC6-201ENST00000377047 ATP6V0D2Q8N8Y2 350 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 AKT1S1Q96B36 256 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 MRPL40Q9NQ50 206 aaKnown RBP14.27□□□□□ -0.12
GPC6-201ENST00000377047 SUFUQ9UMX1 484 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 PHF2O75151 1096 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 ARP10275 920 aa14.27□□□□□ -0.12
GPC6-201ENST00000377047 RTFDC1Q9BY42 306 aaPredicted RBP14.27□□□□□ -0.12
GPC6-201ENST00000377047 A0A1B0GTH6 734 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 PNMA6AP0CW24 399 aaPredicted RBP14.27□□□□□ -0.13
GPC6-201ENST00000377047 USP10Q14694 798 aaKnown RBP14.27□□□□□ -0.13
GPC6-201ENST00000377047 TMEM132BQ14DG7 1078 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 C1orf146Q5VVC0 180 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 TSPAN17Q96FV3 270 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 CEP19Q96LK0 163 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 CINPQ9BW66 212 aaPredicted RBP14.27□□□□□ -0.13
GPC6-201ENST00000377047 PXMP2Q9NR77 195 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 ZC3H7BQ9UGR2 993 aaKnown RBP14.27□□□□□ -0.13
GPC6-201ENST00000377047 DDTLA6NHG4 134 aaPredicted RBP14.27□□□□□ -0.13
GPC6-201ENST00000377047 KLK7P49862 253 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 GJB7Q6PEY0 223 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 SNX31Q8N9S9 440 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 RFWD2Q8NHY2 731 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 HASPINQ8TF76 798 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 ARL8AQ96BM9 186 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 MTBPQ96DY7 904 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 AP1G2O75843 785 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 PYGLP06737 847 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 RGS9BPQ6ZS82 235 aa14.27□□□□□ -0.13
GPC6-201ENST00000377047 C20orf96Q9NUD7 363 aaPredicted RBP14.27□□□□□ -0.13
GPC6-201ENST00000377047 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.27□□□□□ -0.13
GPC6-201ENST00000377047 WASHC5Q12768 1159 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 ZRANB3Q5FWF4 1079 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 PKN3Q6P5Z2 889 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 TRAPPC11Q7Z392 1133 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 SEPT8Q92599 483 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 C17orf75Q9HAS0 396 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 HOXA2O43364 376 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 MBL2P11226 248 aaPredicted RBP14.26□□□□□ -0.13
GPC6-201ENST00000377047 SLC11A2P49281 568 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 RRM2BQ7LG56 351 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 CYP4F11Q9HBI6 524 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 SFMBT1Q9UHJ3 866 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 TTLL13PA6NNM8 815 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 ZNF263O14978 683 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 ARMC6Q6NXE6 501 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 KCTD17Q8N5Z5 321 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 SPATA18Q8TC71 538 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 KRT35Q92764 455 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 CD274Q9NZQ7 290 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 TAF6LQ9Y6J9 622 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 OCM2P0CE71 109 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 OCMP0CE72 109 aaPredicted RBP14.26□□□□□ -0.13
GPC6-201ENST00000377047 KLRC1P26715 233 aa14.26□□□□□ -0.13
GPC6-201ENST00000377047 MKRN4PQ13434 485 aaPredicted RBP14.26□□□□□ -0.13
GPC6-201ENST00000377047 NR1H4Q96RI1 486 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms