RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 UPF3AQ9H1J1 476 aaKnown RBP6.28□□□□□ -1.4
SSX1-201ENST00000376919 ATXN3LQ9H3M9 355 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 AZI2Q9H6S1 392 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 KCNH7Q9NS40 1196 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 CRIM1Q9NZV1 1036 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 MKL2Q9ULH7 1088 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 Q9Y3F1 56 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 PCDHB12Q9Y5F1 795 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 UBIAD1Q9Y5Z9 338 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 FHOD1Q9Y613 1164 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 CEP290O15078 2479 aa6.28□□□□□ -1.4
SSX1-201ENST00000376919 MYH15Q9Y2K3 1946 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 MEGF11A6BM72 1044 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 FAM86B1E9PN63 330 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 IPO5O00410 1097 aaKnown RBP6.27□□□□□ -1.41
SSX1-201ENST00000376919 MAFGO15525 162 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 WIPF1O43516 503 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 NEMFO60524 1076 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 FAM86B2P0C5J1 330 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 ARP10275 920 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 ITGB5P18084 799 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 MARK3P27448 753 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 CST5P28325 142 aaPredicted RBP6.27□□□□□ -1.41
SSX1-201ENST00000376919 ICAM3P32942 547 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 MCM7P33993 719 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 USP11P51784 963 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 KRT85P78386 507 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 GUCY1A3Q02108 690 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 ARHGAP1Q07960 439 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 KLF1Q13351 362 aaPredicted RBP6.27□□□□□ -1.41
SSX1-201ENST00000376919 GTF2H3Q13889 308 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 SLBPQ14493 270 aaKnown RBP eCLIP6.27□□□□□ -1.41
SSX1-201ENST00000376919 CALCRLQ16602 461 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 TMEM95Q3KNT9 176 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 TMEM63BQ5T3F8 832 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 FAM160B1Q5W0V3 765 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 MIS18BP1Q6P0N0 1132 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 METTL7BQ6UX53 244 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 NIPA1Q7RTP0 329 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 C11orf74Q86VG3 221 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 NOSTRINQ8IVI9 506 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 C7orf31Q8N865 590 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 FBXO18Q8NFZ0 1043 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 PPTC7Q8NI37 304 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 TTC17Q96AE7 1141 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 AHCYL2Q96HN2 611 aaKnown RBP6.27□□□□□ -1.41
SSX1-201ENST00000376919 INTS4Q96HW7 963 aaKnown RBP6.27□□□□□ -1.41
SSX1-201ENST00000376919 CCDC43Q96MW1 224 aaKnown RBP6.27□□□□□ -1.41
SSX1-201ENST00000376919 TMPRSS13Q9BYE2 586 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 FOXP1Q9H334 677 aaPredicted RBP6.27□□□□□ -1.41
SSX1-201ENST00000376919 AGO4Q9HCK5 861 aaKnown RBP6.27□□□□□ -1.41
SSX1-201ENST00000376919 EMC7Q9NPA0 242 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 CYP26B1Q9NR63 512 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 SLC9A2Q9UBY0 812 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 ZKSCAN5Q9Y2L8 839 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 PCDHA9Q9Y5H5 950 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 NR2E3Q9Y5X4 410 aa6.27□□□□□ -1.41
SSX1-201ENST00000376919 ELP1O95163 1332 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 PDE4DIPQ5VU43 2346 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 ADAMTS3O15072 1205 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 WISP1O95388 367 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 CYP3A4P08684 503 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 KCNA2P16389 499 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 TCF7P36402 384 aaPredicted RBP6.26□□□□□ -1.41
SSX1-201ENST00000376919 RTP1P59025 263 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 ZNF445P59923 1031 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 PSMC6P62333 389 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 CUL4AQ13619 759 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 ITGA7Q13683 1181 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 TMEM266Q2M3C6 531 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 HSDL1Q3SXM5 330 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 TRIM60Q495X7 471 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 TTC38Q5R3I4 469 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 NCAPH2Q6IBW4 605 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 CCDC62Q6P9F0 684 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 ABHD17CQ6PCB6 329 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 IGF2-ASQ6U949 168 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 MOXD1Q6UVY6 613 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 TRMT1LQ7Z2T5 733 aaKnown RBP6.26□□□□□ -1.41
SSX1-201ENST00000376919 MIER3Q7Z3K6 550 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 MTDHQ86UE4 582 aaKnown RBP6.26□□□□□ -1.41
SSX1-201ENST00000376919 CYP2W1Q8TAV3 490 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 TNPO1Q92973 898 aaKnown RBP6.26□□□□□ -1.41
SSX1-201ENST00000376919 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 ZFYVE21Q9BQ24 234 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 ELAC2Q9BQ52 826 aaKnown RBP6.26□□□□□ -1.41
SSX1-201ENST00000376919 SENP7Q9BQF6 1050 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 NOL6Q9H6R4 1146 aaKnown RBP6.26□□□□□ -1.41
SSX1-201ENST00000376919 PPCSQ9HAB8 311 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 TBC1D22BQ9NU19 505 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 FBXL21Q9UKT6 434 aa6.26□□□□□ -1.41
SSX1-201ENST00000376919 NFASCO94856 1347 aa6.25□□□□□ -1.41
SSX1-201ENST00000376919 ALPK3Q96L96 1907 aa6.25□□□□□ -1.41
SSX1-201ENST00000376919 MKI67P46013 3256 aaKnown RBP6.25□□□□□ -1.41
SSX1-201ENST00000376919 IGLV3-22A0A075B6J6 115 aa6.25□□□□□ -1.41
SSX1-201ENST00000376919 WDR64B1ANS9 1081 aa6.25□□□□□ -1.41
SSX1-201ENST00000376919 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
SSX1-201ENST00000376919 MEIS1O00470 390 aa6.25□□□□□ -1.41
SSX1-201ENST00000376919 MSH4O15457 936 aa6.25□□□□□ -1.41
SSX1-201ENST00000376919 STX6O43752 255 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms