RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 WDR72Q3MJ13 1102 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 C9orf57Q5W0N0 161 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 RTN4RL1Q86UN2 441 aaPredicted RBP8.33□□□□□ -1.08
SSX9-201ENST00000376909 VPS36Q86VN1 386 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 FAM71AQ8IYT1 594 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 CCAR2Q8N163 923 aaKnown RBP8.33□□□□□ -1.08
SSX9-201ENST00000376909 TMEM130Q8N3G9 435 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 C17orf53Q8N3J3 647 aaPredicted RBP8.33□□□□□ -1.08
SSX9-201ENST00000376909 LRRC52Q8N7C0 313 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 DBF4BQ8NFT6 615 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 LINC01599Q8WXQ3 324 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 SCLYQ96I15 445 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 ZFP42Q96MM3 310 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 PPP1R10Q96QC0 940 aaKnown RBP8.33□□□□□ -1.08
SSX9-201ENST00000376909 EIF3CQ99613 913 aaKnown RBP8.33□□□□□ -1.08
SSX9-201ENST00000376909 DESI2Q9BSY9 194 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 HAUS4Q9H6D7 363 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 RSAD1Q9HA92 442 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 KCND1Q9NSA2 647 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 RNF19AQ9NV58 838 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 NXF1Q9UBU9 619 aaKnown RBP8.33□□□□□ -1.08
SSX9-201ENST00000376909 TUBGCP4Q9UGJ1 667 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 PPP2R2CQ9Y2T4 447 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 PCDHB4Q9Y5E5 795 aa8.33□□□□□ -1.08
SSX9-201ENST00000376909 ANO9A1A5B4 782 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 PIRO00625 290 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 ENPP3O14638 875 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 CYP26A1O43174 497 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 ZNF500O60304 480 aaPredicted RBP8.32□□□□□ -1.08
SSX9-201ENST00000376909 ACO1P21399 889 aaKnown RBP8.32□□□□□ -1.08
SSX9-201ENST00000376909 RFC2P35250 354 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 CLCN1P35523 988 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 PNPLA4P41247 253 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 SCNN1GP51170 649 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 KIF11P52732 1056 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 BPIFB4P59827 614 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 TNNC1P63316 161 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 KRT83P78385 493 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 PTK2Q05397 1052 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 ASTE1Q2TB18 679 aaPredicted RBP8.32□□□□□ -1.08
SSX9-201ENST00000376909 GLB1LQ6UWU2 654 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 SCARA5Q6ZMJ2 495 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 ZNF571Q7Z3V5 609 aaPredicted RBP8.32□□□□□ -1.08
SSX9-201ENST00000376909 ZNF598Q86UK7 904 aaKnown RBP8.32□□□□□ -1.08
SSX9-201ENST00000376909 UBR7Q8N806 425 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 ACRBPQ8NEB7 543 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 GSTCDQ8NEC7 633 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 ZNF560Q96MR9 790 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 ARID3AQ99856 593 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.32□□□□□ -1.08
SSX9-201ENST00000376909 WNT8AQ9H1J5 351 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 ELAC1Q9H777 363 aaKnown RBP8.32□□□□□ -1.08
SSX9-201ENST00000376909 CYP3A43Q9HB55 503 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 SPTLC3Q9NUV7 552 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 MIOSQ9NXC5 875 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 TRMT1Q9NXH9 659 aaKnown RBP8.32□□□□□ -1.08
SSX9-201ENST00000376909 POLIQ9UNA4 740 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 PCDHB3Q9Y5E6 796 aa8.32□□□□□ -1.08
SSX9-201ENST00000376909 GOLGA6L9A6NEM1 432 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 PPEF2O14830 753 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 KIAA0355O15063 1070 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 INPPL1O15357 1258 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 LCA5LO95447 670 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 TIMP1P01033 207 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 CFHP08603 1231 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 WEE2P0C1S8 567 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 CYP11B1P15538 503 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 CD58P19256 250 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 EN2P19622 333 aaPredicted RBP8.31□□□□□ -1.08
SSX9-201ENST00000376909 TNFAIP3P21580 790 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 LRPAP1P30533 357 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 RPL9P32969 192 aaKnown RBP8.31□□□□□ -1.08
SSX9-201ENST00000376909 ASPAP45381 313 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 PDE6CP51160 858 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 GFPT1Q06210 699 aaPredicted RBP8.31□□□□□ -1.08
SSX9-201ENST00000376909 SOX4Q06945 474 aaPredicted RBP8.31□□□□□ -1.08
SSX9-201ENST00000376909 GRIK3Q13003 919 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 BMS1Q14692 1282 aaKnown RBP8.31□□□□□ -1.08
SSX9-201ENST00000376909 SLC18A3Q16572 532 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 SV2CQ496J9 727 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 TMEM270Q6UE05 265 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 DEFB128Q7Z7B8 93 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 KIAA1328Q86T90 577 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 TXLNBQ8N3L3 684 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 TTC39CQ8N584 583 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 RBBP8NLQ8NC74 664 aaPredicted RBP8.31□□□□□ -1.08
SSX9-201ENST00000376909 URGCPQ8TCY9 931 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 PPP1R13BQ96KQ4 1090 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 MMS19Q96T76 1030 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 AGPAT1Q99943 283 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 BCO2Q9BYV7 579 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 FAM124BQ9H5Z6 455 aaPredicted RBP8.31□□□□□ -1.08
SSX9-201ENST00000376909 GOLGA2P5Q9HBQ8 144 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 LUC7LQ9NQ29 371 aaKnown RBP8.31□□□□□ -1.08
SSX9-201ENST00000376909 PRDM5Q9NQX1 630 aaPredicted RBP8.31□□□□□ -1.08
SSX9-201ENST00000376909 CISHQ9NSE2 258 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 TMEM161AQ9NX61 479 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 ADAMTS1Q9UHI8 967 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
SSX9-201ENST00000376909 CNTN6Q9UQ52 1028 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms