RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 SPTLC1O15269 473 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 VNN2O95498 520 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 GJA1P17302 382 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 GAP43P17677 238 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 ALDH1A3P47895 512 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 SLC39A14Q15043 492 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 POSTNQ15063 836 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 ZC3H14Q6PJT7 736 aaKnown RBP22.78■■□□□ 1.24
VSX1-201ENST00000376707 DNASE1L2Q92874 299 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 ZSWIM3Q96MP5 696 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 USP28Q96RU2 1077 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 TRMT61BQ9BVS5 477 aaKnown RBP22.78■■□□□ 1.24
VSX1-201ENST00000376707 CRISPLD1Q9H336 500 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 SEMA4AQ9H3S1 761 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 SLITRK6Q9H5Y7 841 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 HEBP1Q9NRV9 189 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 FOXD4L1Q9NU39 408 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 SPATA6Q9NWH7 488 aaPredicted RBP22.78■■□□□ 1.24
VSX1-201ENST00000376707 EXOC7Q9UPT5 735 aa22.78■■□□□ 1.24
VSX1-201ENST00000376707 ANO9A1A5B4 782 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 MTMR11A4FU01 709 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 MYMKA6NI61 221 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 MOSPD3O75425 235 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 SP9P0CG40 484 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 TEAD2Q15562 447 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 CENPPQ6IPU0 288 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 ZNF852Q6ZMS4 543 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 CCDC73Q6ZRK6 1079 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 ZSCAN18Q8TBC5 510 aaPredicted RBP22.77■■□□□ 1.24
VSX1-201ENST00000376707 NELL2Q99435 816 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 GPR88Q9GZN0 384 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 IKZF4Q9H2S9 585 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 TBC1D7Q9P0N9 293 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 DSEQ9UL01 958 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 SLC27A5Q9Y2P5 690 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 MRPS17Q9Y2R5 130 aaKnown RBP22.77■■□□□ 1.24
VSX1-201ENST00000376707 COL4A3Q01955 1670 aa22.77■■□□□ 1.24
VSX1-201ENST00000376707 NCAM2O15394 837 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 STAT6P42226 847 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 MAGEA9P43362 315 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 NASPP49321 788 aaPredicted RBP22.76■■□□□ 1.23
VSX1-201ENST00000376707 POU5F1Q01860 360 aaKnown RBP22.76■■□□□ 1.23
VSX1-201ENST00000376707 METTL23Q86XA0 190 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 ATAD1Q8NBU5 361 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 SHKBP1Q8TBC3 707 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 IRF7Q92985 503 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 DNAJC19Q96DA6 116 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 ACCSQ96QU6 501 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 TMEM209Q96SK2 561 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 DPP3Q9NY33 737 aa22.76■■□□□ 1.23
VSX1-201ENST00000376707 TULP1O00294 542 aaPredicted RBP22.75■■□□□ 1.23
VSX1-201ENST00000376707 LAMTOR5O43504 91 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 PPP1R37O75864 691 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 GCNT3O95395 438 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 LMNAP02545 664 aaKnown RBP22.75■■□□□ 1.23
VSX1-201ENST00000376707 CYP11A1P05108 521 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 IDEP14735 1019 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 PSMC3P17980 439 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 TARSP26639 723 aaKnown RBP22.75■■□□□ 1.23
VSX1-201ENST00000376707 VIPR2P41587 438 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 TAF6P49848 677 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 CRELD2Q6UXH1 353 aaPredicted RBP22.75■■□□□ 1.23
VSX1-201ENST00000376707 VITQ6UXI7 678 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 DEPDC1BQ8WUY9 529 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 PYM1Q9BRP8 204 aaKnown RBP22.75■■□□□ 1.23
VSX1-201ENST00000376707 STRA6Q9BX79 667 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 PANK2Q9BZ23 570 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 DNAJC25Q9H1X3 360 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 TRPV4Q9HBA0 871 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 ASB3Q9Y575 518 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 DMDP11532 3685 aa22.75■■□□□ 1.23
VSX1-201ENST00000376707 A0A1W2PRU2 124 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 CYB561D2O14569 222 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 IL18RAPO95256 599 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 ADSSP30520 456 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 GDI1P31150 447 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 L1TD1Q5T7N2 865 aaKnown RBP22.74■■□□□ 1.23
VSX1-201ENST00000376707 TMC8Q8IU68 726 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 THEM5Q8N1Q8 247 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 TTC9BQ8N6N2 239 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 OR10T2Q8NGX3 314 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 LRRC3Q9BY71 257 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 PCDHB13Q9Y5F0 798 aa22.74■■□□□ 1.23
VSX1-201ENST00000376707 MAN2B1O00754 1011 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 SOAT2O75908 522 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 KCNA1Q09470 495 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 SLC39A12Q504Y0 691 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 ITIH5Q86UX2 942 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 NT5DC4Q86YG4 428 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 EFCAB13Q8IY85 973 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 MAML2Q8IZL2 1156 aaPredicted RBP22.73■■□□□ 1.23
VSX1-201ENST00000376707 SYCP3Q8IZU3 236 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 E2F7Q96AV8 911 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 CLDN23Q96B33 292 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 FAM213AQ9BRX8 229 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 ZNF334Q9HCZ1 680 aaPredicted RBP22.73■■□□□ 1.23
VSX1-201ENST00000376707 OLFML3Q9NRN5 406 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 HSFX1Q9UBD0 423 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 FBXO4Q9UKT5 387 aa22.73■■□□□ 1.23
VSX1-201ENST00000376707 ZNF263O14978 683 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms