RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 B3GNT9Q6UX72 402 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 TMEM174Q8WUU8 243 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 HEY2Q9UBP5 337 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 SCOCQ9UIL1 159 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 SUGT1Q9Y2Z0 365 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 PI4K2BG5E9Z4 385 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 ARSEP51690 589 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 PTP4A2Q12974 167 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 GPS1Q13098 491 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 LRRC74BQ6ZQY2 392 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 SH3BP5LQ7L8J4 393 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 TRMT1LQ7Z2T5 733 aaKnown RBP17.44■□□□□ 0.38
TRIM39-201ENST00000376656 RHOT1Q8IXI2 618 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 CERKQ8TCT0 537 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 WDR60Q8WVS4 1066 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 TEKT1Q969V4 418 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 ALG13Q9NP73 1137 aaKnown RBP17.44■□□□□ 0.38
TRIM39-201ENST00000376656 GPRC5CQ9NQ84 441 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRIM39-201ENST00000376656 RAB20Q9NX57 234 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 COQ4Q9Y3A0 265 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 HAUS5O94927 633 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 TROVE2P10155 538 aaKnown RBP eCLIP17.44■□□□□ 0.38
TRIM39-201ENST00000376656 OCRLQ01968 901 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 CCDC142Q17RM4 750 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 DOK7Q18PE1 504 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 ATP13A4Q4VNC1 1196 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 CEP128Q6ZU80 1094 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 ANKMY2Q8IV38 441 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 LARGE2Q8N3Y3 721 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 ZNF276Q8N554 614 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 FBXL13Q8NEE6 735 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 TMEM8AQ9HCN3 771 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 PSMC3IPQ9P2W1 217 aaPredicted RBP17.44■□□□□ 0.38
TRIM39-201ENST00000376656 ZNF148Q9UQR1 794 aa17.44■□□□□ 0.38
TRIM39-201ENST00000376656 TMEM150BA6NC51 233 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 IPO5O00410 1097 aaKnown RBP17.43■□□□□ 0.38
TRIM39-201ENST00000376656 HNRNPCL1O60812 293 aaKnown RBP17.43■□□□□ 0.38
TRIM39-201ENST00000376656 PSMG1O95456 288 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 SKIP12755 728 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 RPS6KA3P51812 740 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 POLE2P56282 527 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 GTF2BQ00403 316 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 SLC34A1Q06495 639 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 ALCAMQ13740 583 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
TRIM39-201ENST00000376656 TMEM179Q6ZVK1 233 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 FBXO6Q9NRD1 293 aaPredicted RBP17.43■□□□□ 0.38
TRIM39-201ENST00000376656 PLSCR1O15162 318 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 GYG2O15488 501 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 PSTPIP1O43586 416 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 LIASO43766 372 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 BBOX1O75936 387 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 SSTR3P32745 418 aaPredicted RBP17.43■□□□□ 0.38
TRIM39-201ENST00000376656 PEX3P56589 373 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 TRAPPC3LQ5T215 181 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 CCDC174Q6PII3 467 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 RINLQ6ZS11 566 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 KATNAL2Q8IYT4 538 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 ZNF398Q8TD17 642 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 ZFAND2BQ8WV99 257 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 FAM81BQ96LP2 452 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 COA1Q9GZY4 146 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 KCNQ5Q9NR82 932 aa17.43■□□□□ 0.38
TRIM39-201ENST00000376656 GOLGA8RI6L899 631 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 SMAPO00193 183 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 RTN3O95197 1032 aaPredicted RBP17.42■□□□□ 0.38
TRIM39-201ENST00000376656 POLR2MP0CAP2 368 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 MAPTP10636 758 aaKnown RBP17.42■□□□□ 0.38
TRIM39-201ENST00000376656 KCNA3P22001 575 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 CETN2P41208 172 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 PDIA2Q13087 525 aaKnown RBP17.42■□□□□ 0.38
TRIM39-201ENST00000376656 MTHFD1LQ6UB35 978 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 PTPRN2Q92932 1015 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 KLF6Q99612 283 aaPredicted RBP17.42■□□□□ 0.38
TRIM39-201ENST00000376656 SLC17A7Q9P2U7 560 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 GOLGA8SH3BPF8 625 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 GOLGA8MH3BSY2 632 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 ZWINTO95229 277 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 CFHP08603 1231 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 CACNA2D1P54289 1103 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 GPX6P59796 221 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 ABCB5Q2M3G0 1257 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 TCP10LQ8TDR4 215 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 SPIRE2Q8WWL2 714 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 C11orf70Q9BRQ4 267 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 ZCWPW1Q9H0M4 648 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 PI4KBQ9UBF8 816 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 ZBTB21Q9ULJ3 1066 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 QSER1Q2KHR3 1735 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 ALOX15BO15296 676 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 SERPINB3P29508 390 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 NSFP46459 744 aaKnown RBP17.42■□□□□ 0.38
TRIM39-201ENST00000376656 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 LRRC6Q86X45 466 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 KBTBD2Q8IY47 623 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 SCYL3Q8IZE3 742 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 OGFOD1Q8N543 542 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 NSL1Q96IY1 281 aa17.42■□□□□ 0.38
TRIM39-201ENST00000376656 TRIM4Q9C037 500 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms