RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CDHR1Q96JP9 859 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 PAIP2Q9BPZ3 127 aaKnown RBP15.41■□□□□ 0.06
MSH5-201ENST00000375703 KLHL14Q9P2G3 628 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 DNPEPQ9ULA0 475 aa15.41■□□□□ 0.06
MSH5-201ENST00000375703 LRRIQ4A6NIV6 560 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 LIASO43766 372 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 ATF7P17544 494 aaPredicted RBP15.4■□□□□ 0.06
MSH5-201ENST00000375703 NOP14P78316 857 aaKnown RBP15.4■□□□□ 0.06
MSH5-201ENST00000375703 IL9RQ01113 521 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 ZNF268Q14587 947 aaPredicted RBP15.4■□□□□ 0.06
MSH5-201ENST00000375703 ZBTB41Q5SVQ8 909 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 TMEM63BQ5T3F8 832 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 RIBC1Q8N443 379 aaPredicted RBP15.4■□□□□ 0.06
MSH5-201ENST00000375703 DEPTORQ8TB45 409 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 CCHCR1Q8TD31 782 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 ZNF606Q8WXB4 792 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 MAML1Q92585 1016 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 RBM41Q96IZ5 413 aaKnown RBP15.4■□□□□ 0.06
MSH5-201ENST00000375703 MSTO1Q9BUK6 570 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 TARS2Q9BW92 718 aaKnown RBP15.4■□□□□ 0.06
MSH5-201ENST00000375703 FHDC1Q9C0D6 1143 aaPredicted RBP15.4■□□□□ 0.06
MSH5-201ENST00000375703 RXFP1Q9HBX9 757 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 CNTN6Q9UQ52 1028 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 EXOC1LA0A1B0GW35 172 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 DNALI1O14645 258 aaPredicted RBP15.4■□□□□ 0.06
MSH5-201ENST00000375703 TJP3O95049 919 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 ABHD2P08910 425 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 ZSCAN5DPP0CG00 497 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 NF2P35240 595 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 TNFAIP1Q13829 316 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 GLIS1Q8NBF1 620 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 KLHL29Q96CT2 875 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 PITPNM3Q9BZ71 974 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 EURLQ9NYK6 297 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 ANKFY1Q9P2R3 1169 aa15.4■□□□□ 0.06
MSH5-201ENST00000375703 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.4■□□□□ 0.06
MSH5-201ENST00000375703 FAM47DPA6NHR8 397 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 SUPT20HL2P0C7V6 817 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 TCF4P15884 667 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 TAC1P20366 129 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 ARSEP51690 589 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 MTFR1Q15390 333 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 SUPT20HL1Q3ZLR7 823 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 MFSD7Q6UXD7 560 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 OR5B17Q8NGF7 314 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 ASAP3Q8TDY4 903 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 GRAMD1AQ96CP6 724 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 SLITRK1Q96PX8 696 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 CGRRF1Q99675 332 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 VPS33BQ9H267 617 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 FBXO40Q9UH90 709 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 PNMA3Q9UL41 463 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 TMEM191CA6NGB0 347 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 SPATA31C2B4DYI2 1134 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 POC1B-GALNT4F8VUJ3 575 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 IGF2BP3O00425 579 aaKnown RBP eCLIP15.39■□□□□ 0.05
MSH5-201ENST00000375703 TMEM191BP0C7N4 346 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 ETS1P14921 441 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 MMP8P22894 467 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 GLRA2P23416 452 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 FOXN2P32314 431 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 BACE1P56817 501 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 NCOA4Q13772 614 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 CGB2Q6NT52 195 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 PORCNQ9H237 461 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 CXorf56Q9H5V9 222 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 IVNS1ABPQ9Y6Y0 642 aa15.39■□□□□ 0.05
MSH5-201ENST00000375703 HGSO14964 777 aaPredicted RBP15.38■□□□□ 0.05
MSH5-201ENST00000375703 SPAG7O75391 227 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 KRT1P04264 644 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 NAMPTP43490 491 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 WDR4P57081 412 aaKnown RBP15.38■□□□□ 0.05
MSH5-201ENST00000375703 GPS1Q13098 491 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 NR1H3Q13133 447 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 GNPTABQ3T906 1256 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 SEZ6Q53EL9 994 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 EAPPQ56P03 285 aaPredicted RBP15.38■□□□□ 0.05
MSH5-201ENST00000375703 HP1BP3Q5SSJ5 553 aaPredicted RBP15.38■□□□□ 0.05
MSH5-201ENST00000375703 CIAPIN1Q6FI81 312 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 DRICH1Q6PGQ1 229 aaPredicted RBP15.38■□□□□ 0.05
MSH5-201ENST00000375703 RMDN2Q96LZ7 410 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 A0A0B4J269 797 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 EGFRP00533 1210 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 PIGRP01833 764 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 ATP4AP20648 1035 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 RNF43Q68DV7 783 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 ALLCQ8N6M5 410 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 TTC25Q96NG3 672 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 DRG1Q9Y295 367 aaKnown RBP15.38■□□□□ 0.05
MSH5-201ENST00000375703 CNTNAP2Q9UHC6 1331 aa15.38■□□□□ 0.05
MSH5-201ENST00000375703 F8VP50 259 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 HARSP12081 509 aaKnown RBP15.37■□□□□ 0.05
MSH5-201ENST00000375703 PECAM1P16284 738 aaPredicted RBP15.37■□□□□ 0.05
MSH5-201ENST00000375703 GCAP28676 217 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 ALDH5A1P51649 535 aaPredicted RBP15.37■□□□□ 0.05
MSH5-201ENST00000375703 SP2Q02086 613 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 SCARA3Q6AZY7 606 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 DCUN1D2Q6PH85 259 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 FAM47EQ6ZV65 393 aa15.37■□□□□ 0.05
MSH5-201ENST00000375703 TRABD2AQ86V40 505 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms