RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RPAP3Q9H6T3 665 aaPredicted RBP11.74□□□□□ -0.53
CCDC40-203ENST00000374877 MRPL11Q9Y3B7 192 aaKnown RBP11.74□□□□□ -0.53
CCDC40-203ENST00000374877 MYPNQ86TC9 1320 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 ENTPD5O75356 428 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 DCTN3O75935 186 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 P3H1Q32P28 736 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 NT5C1BQ96P26 610 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 TEKT3Q9BXF9 490 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 FZD1Q9UP38 647 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 ACTL7BQ9Y614 415 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 ICAM1P05362 532 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 POLR2MP0CAP2 368 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
CCDC40-203ENST00000374877 TRABD2AQ86V40 505 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 ERO1BQ86YB8 467 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 SAMD3Q8N6K7 520 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 CPA5Q8WXQ8 436 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 MAML1Q92585 1016 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 SMC6Q96SB8 1091 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 TOPORSQ9NS56 1045 aaPredicted RBP11.74□□□□□ -0.53
CCDC40-203ENST00000374877 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
CCDC40-203ENST00000374877 DPPA5A6NC42 116 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
CCDC40-203ENST00000374877 SLC16A4O15374 487 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 ATP4AP20648 1035 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 HHATQ5VTY9 493 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 ANO7Q6IWH7 933 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 LDHDQ86WU2 507 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 TEX9Q8N6V9 391 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 BBOF1Q8ND07 529 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 PARD3BQ8TEW8 1205 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 CFAP57Q96MR6 1250 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 LBHD1Q9BQE6 289 aaPredicted RBP11.73□□□□□ -0.53
CCDC40-203ENST00000374877 VPS37BQ9H9H4 285 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 SLC38A10Q9HBR0 1119 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 FBXO28Q9NVF7 368 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 POLR2AP24928 1970 aaKnown RBP11.73□□□□□ -0.53
CCDC40-203ENST00000374877 A6NHS1 94 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 CXCL11O14625 94 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 RPA3P35244 121 aaPredicted RBP11.73□□□□□ -0.53
CCDC40-203ENST00000374877 RASSF2P50749 326 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 GHRHRQ02643 423 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 HAUS6Q7Z4H7 955 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 LRRC42Q9Y546 428 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 OTOFQ9HC10 1997 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 CD58P19256 250 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 PTDSS1P48651 473 aaKnown RBP11.73□□□□□ -0.53
CCDC40-203ENST00000374877 OAZ1P54368 228 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 FKBP1BP68106 108 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 MXRA7P84157 204 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 MOGSQ13724 837 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 PRKG1Q13976 671 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 SNRNP35Q16560 246 aaKnown RBP11.73□□□□□ -0.53
CCDC40-203ENST00000374877 CLEC16AQ2KHT3 1053 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 MUM1Q2TAK8 710 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 GNPTABQ3T906 1256 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 TAF1BQ53T94 588 aaPredicted RBP11.73□□□□□ -0.53
CCDC40-203ENST00000374877 LDLRAD1Q5T700 205 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 KRT39Q6A163 491 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 DLK2Q6UY11 383 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 TAS1R2Q8TE23 839 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 INPP5DQ92835 1189 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 SLC7A6OSQ96CW6 309 aaPredicted RBP11.73□□□□□ -0.53
CCDC40-203ENST00000374877 FAM84AQ96KN4 292 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 ANKRD27Q96NW4 1050 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 PI4K2AQ9BTU6 479 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 MAF1Q9H063 256 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 KIAA1586Q9HCI6 787 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 KLHL11Q9NVR0 708 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 GRID1Q9ULK0 1009 aa11.73□□□□□ -0.53
CCDC40-203ENST00000374877 LRRD1A4D1F6 860 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 WDR91A4D1P6 747 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 EDF1O60869 148 aaKnown RBP11.72□□□□□ -0.53
CCDC40-203ENST00000374877 ZBED4O75132 1171 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 T-ENOLP0DO92 83 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 HMGCS2P54868 508 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 PEX3P56589 373 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 CENPCQ03188 943 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 PPIL2Q13356 520 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 TSNAXIP1Q2TAA8 658 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 PCNX4Q63HM2 1172 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 KAZNQ674X7 775 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 MIER3Q7Z3K6 550 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 RIBC1Q8N443 379 aaPredicted RBP11.72□□□□□ -0.53
CCDC40-203ENST00000374877 HELQQ8TDG4 1101 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 DDX27Q96GQ7 796 aaKnown RBP11.72□□□□□ -0.53
CCDC40-203ENST00000374877 DENND2DQ9H6A0 471 aaPredicted RBP11.72□□□□□ -0.53
CCDC40-203ENST00000374877 NPHS2Q9NP85 383 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 GPRC5CQ9NQ84 441 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 EURLQ9NYK6 297 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 ZFP69BQ9UJL9 534 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 ADAMTS5Q9UNA0 930 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 KCNH4Q9UQ05 1017 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 MROH7Q68CQ1 1323 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 TMEM150BA6NC51 233 aa11.72□□□□□ -0.53
CCDC40-203ENST00000374877 PLS3P13797 630 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms