RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 CLTAP09496 248 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 ACO1P21399 889 aaKnown RBP12.87□□□□□ -0.35
HMGCL-202ENST00000374487 IRAK1P51617 712 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 AP3M2P53677 418 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 TRIM72Q6ZMU5 477 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 TMC3Q7Z5M5 1100 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 PASD1Q8IV76 773 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 LRRC71Q8N4P6 559 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 ATP8B4Q8TF62 1192 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 ATP6V1G3Q96LB4 118 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 PCYOX1Q9UHG3 505 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 SNX24Q9Y343 169 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.87□□□□□ -0.35
HMGCL-202ENST00000374487 NUB1Q9Y5A7 615 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 ASB14A6NK59 587 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 TTLL13PA6NNM8 815 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 HMGB1P1B2RPK0 211 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-202ENST00000374487 THAP12O43422 761 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 MSCO60682 206 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 CYP1A1P04798 512 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-202ENST00000374487 TNFSF9P41273 254 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 DRG2P55039 364 aaKnown RBP12.87□□□□□ -0.35
HMGCL-202ENST00000374487 PLTPP55058 493 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 GNGT1P63211 74 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 BEX3Q00994 111 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 CENPCQ03188 943 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 UAP1Q16222 522 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-202ENST00000374487 TMEM132AQ24JP5 1023 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 C2CD6Q53TS8 623 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 PLPPR4Q7Z2D5 763 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 RHPN2Q8IUC4 686 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 RBBP8NLQ8NC74 664 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-202ENST00000374487 OR2W6PQ8NHA6 318 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 PPP1R13LQ8WUF5 828 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 RUNDC3BQ96NL0 473 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 JPH2Q9BR39 696 aaPredicted RBP12.87□□□□□ -0.35
HMGCL-202ENST00000374487 XPNPEP3Q9NQH7 507 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 ATP8A1Q9Y2Q0 1164 aa12.87□□□□□ -0.35
HMGCL-202ENST00000374487 TCRBV7S2A1N4TA0A589 114 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 PRKCBP05771 671 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
HMGCL-202ENST00000374487 AKR1A1P14550 325 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 SLC1A1P43005 524 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 ATP1A2P50993 1020 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 ATN1P54259 1190 aaPredicted RBP12.86□□□□□ -0.35
HMGCL-202ENST00000374487 TTC19Q6DKK2 380 aaPredicted RBP12.86□□□□□ -0.35
HMGCL-202ENST00000374487 RUFY4Q6ZNE9 571 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 WDR49Q8IV35 697 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 EFCAB13Q8IY85 973 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 C1orf131Q8NDD1 294 aaKnown RBP12.86□□□□□ -0.35
HMGCL-202ENST00000374487 ACO2Q99798 780 aaKnown RBP12.86□□□□□ -0.35
HMGCL-202ENST00000374487 C2orf40Q9H1Z8 148 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 MRPL47Q9HD33 250 aaKnown RBP12.86□□□□□ -0.35
HMGCL-202ENST00000374487 ADAM22Q9P0K1 906 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 MROH7Q68CQ1 1323 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 OGTO15294 1046 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 RARAP10276 462 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 RARBP10826 455 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 NR1D1P20393 614 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 GBP1P32455 592 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 SSTR3P32745 418 aaPredicted RBP12.86□□□□□ -0.35
HMGCL-202ENST00000374487 PTGIRP43119 386 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 SKOR1P84550 965 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 TNFAIP2Q03169 654 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 IFFO1Q0D2I5 559 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 LLGL1Q15334 1064 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 DUOXA2Q1HG44 320 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 SKIDA1Q1XH10 827 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 TTC27Q6P3X3 843 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 NLRP4Q96MN2 994 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 C11orf70Q9BRQ4 267 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 TRIM7Q9C029 511 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 SENP6Q9GZR1 1112 aaPredicted RBP12.86□□□□□ -0.35
HMGCL-202ENST00000374487 SMARCAD1Q9H4L7 1026 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 TMBIM4Q9HC24 238 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 BCCIPQ9P287 314 aaKnown RBP eCLIP12.86□□□□□ -0.35
HMGCL-202ENST00000374487 PARP2Q9UGN5 583 aa12.86□□□□□ -0.35
HMGCL-202ENST00000374487 UMODL1Q5DID0 1318 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 H0YGN5 161 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 ADAMTS4O75173 837 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 LGR5O75473 907 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 CST3P01034 146 aaPredicted RBP12.85□□□□□ -0.35
HMGCL-202ENST00000374487 COILP38432 576 aaPredicted RBP12.85□□□□□ -0.35
HMGCL-202ENST00000374487 SLC26A2P50443 739 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 ZNF844Q08AG5 666 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
HMGCL-202ENST00000374487 TRPC3Q13507 836 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 TFDP1Q14186 410 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 PLCB4Q15147 1175 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 SURF1Q15526 300 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 CDCA2Q69YH5 1023 aaPredicted RBP12.85□□□□□ -0.35
HMGCL-202ENST00000374487 PPP1R2P3Q6NXS1 205 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 KDM7AQ6ZMT4 941 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 ZDHHC14Q8IZN3 488 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 VCPIP1Q96JH7 1222 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 MTMR12Q9C0I1 747 aa12.85□□□□□ -0.35
HMGCL-202ENST00000374487 CCDC113Q9H0I3 377 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms