RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 FEZF2Q8TBJ5 459 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 IPO4Q8TEX9 1081 aaKnown RBP9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 SLC20A1Q8WUM9 679 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 PTCD2Q8WV60 388 aaKnown RBP9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 ZNF606Q8WXB4 792 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 IFT81Q8WYA0 676 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 TATDN2Q93075 761 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 ARHGEF26Q96DR7 871 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 FGD4Q96M96 766 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 PCDHB18PQ96TA0 734 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 PSMB7Q99436 277 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 FMO2Q99518 471 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 POP1Q99575 1024 aaKnown RBP9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 KATNAL1Q9BW62 490 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 IKZF4Q9H2S9 585 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 CNOT10Q9H9A5 744 aaKnown RBP9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 SUGCTQ9HAC7 445 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 CYLDQ9NQC7 956 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 ANKFY1Q9P2R3 1169 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 ANAPC7Q9UJX3 599 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 NFU1Q9UMS0 254 aa9.27□□□□□ -0.93
SNRNP40-202ENST00000373720 A0A1B0GUA9 196 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 MANSC4A6NHS7 340 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 H3BRB1 525 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 INO80B-WBP1J3KQ70 363 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 POLR3GO15318 223 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 TJP3O95049 919 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 VNN1O95497 513 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 ERBB2P04626 1255 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 LGALS2P05162 132 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 RARGP13631 454 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 ADORA2AP29274 412 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 COILP38432 576 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 CARSP49589 748 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 RBP5P82980 135 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 LACTBP83111 547 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 BYSLQ13895 437 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 HADHQ16836 314 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 TMEM132AQ24JP5 1023 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 ZNF699Q32M78 642 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 Q3C1V9 767 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 ODF2Q5BJF6 829 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 C6orf118Q5T5N4 469 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 CCDC137Q6PK04 289 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 TMEM270Q6UE05 265 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 ARCQ7LC44 396 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 PLEKHH3Q7Z736 793 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 DPP9Q86TI2 863 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 RHPN2Q8IUC4 686 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 KLHL7Q8IXQ5 586 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 STK32AQ8WU08 396 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 CASKIN2Q8WXE0 1202 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 MAGOHBQ96A72 148 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 PGM2Q96G03 612 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 SH2D3AQ9BRG2 576 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 BCO2Q9BYV7 579 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 PABPC3Q9H361 631 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 TUT1Q9H6E5 874 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 FAM204AQ9H8W3 233 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 TXNRD2Q9NNW7 524 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 TOPORSQ9NS56 1045 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 TAS2R14Q9NYV8 317 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 GGA2Q9UJY4 613 aa9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 DRG1Q9Y295 367 aaKnown RBP9.26□□□□□ -0.93
SNRNP40-202ENST00000373720 POLR2AP24928 1970 aaKnown RBP9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 CCL15-CCL14A0A0B4J2E2 113 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 SMIM35A0A1B0GVV1 85 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 TMEM191CA6NGB0 347 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 A6NJR5 290 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 SIGLEC16A6NMB1 481 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 ZNF487B1APH4 448 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 AGPSO00116 658 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 HRO43593 1189 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 SRGAP2CP0DJJ0 459 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 VDRP11473 427 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 INSRRP14616 1297 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 CAPN2P17655 700 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 SCNN1AP37088 669 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 PNPLA4P41247 253 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 GRM5P41594 1212 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 GABRB2P47870 512 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 CPT1AP50416 773 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 SLC7A5Q01650 507 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 ADCY2Q08462 1091 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 MAMLD1Q13495 774 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 CNGA2Q16280 664 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 CCL15Q16663 113 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 EAPPQ56P03 285 aaPredicted RBP9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 OLFML2BQ68BL8 750 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 MTHFD1LQ6UB35 978 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 C4orf22Q6V702 233 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 KDM7AQ6ZMT4 941 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 PCGF5Q86SE9 256 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 UNC93AQ86WB7 457 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 ERICH1Q86X53 443 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 JAMLQ86YT9 394 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 CCDC105Q8IYK2 499 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 THNSL1Q8IYQ7 743 aa9.25□□□□□ -0.93
SNRNP40-202ENST00000373720 LRRC52Q8N7C0 313 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms