RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 PNMA5Q96PV4 448 aa11□□□□□ -0.65
NUP188-201ENST00000372577 MTFR1LQ9H019 292 aa11□□□□□ -0.65
NUP188-201ENST00000372577 EEF2KO00418 725 aaKnown RBP11□□□□□ -0.65
NUP188-201ENST00000372577 CYP11B1P15538 503 aa11□□□□□ -0.65
NUP188-201ENST00000372577 CHN1P15882 459 aa11□□□□□ -0.65
NUP188-201ENST00000372577 H2AFXP16104 143 aaPredicted RBP11□□□□□ -0.65
NUP188-201ENST00000372577 MRC1P22897 1456 aa11□□□□□ -0.65
NUP188-201ENST00000372577 CYP24A1Q07973 514 aa11□□□□□ -0.65
NUP188-201ENST00000372577 EZH2Q15910 746 aaKnown RBP11□□□□□ -0.65
NUP188-201ENST00000372577 DACT2Q5SW24 774 aa11□□□□□ -0.65
NUP188-201ENST00000372577 KIAA0895Q8NCT3 520 aa11□□□□□ -0.65
NUP188-201ENST00000372577 SPDL1Q96EA4 605 aa11□□□□□ -0.65
NUP188-201ENST00000372577 NUDT12Q9BQG2 462 aa11□□□□□ -0.65
NUP188-201ENST00000372577 CATSPERBQ9H7T0 1116 aa11□□□□□ -0.65
NUP188-201ENST00000372577 ECT2Q9H8V3 914 aa11□□□□□ -0.65
NUP188-201ENST00000372577 GTSE1Q9NYZ3 720 aa11□□□□□ -0.65
NUP188-201ENST00000372577 LRRC10BA6NIK2 292 aa11□□□□□ -0.65
NUP188-201ENST00000372577 CFLARO15519 480 aa11□□□□□ -0.65
NUP188-201ENST00000372577 E2F4Q16254 413 aa11□□□□□ -0.65
NUP188-201ENST00000372577 FOXR2Q6PJQ5 311 aa11□□□□□ -0.65
NUP188-201ENST00000372577 ARHGAP18Q8N392 663 aa11□□□□□ -0.65
NUP188-201ENST00000372577 ZKSCAN7Q9P0L1 754 aaPredicted RBP11□□□□□ -0.65
NUP188-201ENST00000372577 WHRNQ9P202 907 aa11□□□□□ -0.65
NUP188-201ENST00000372577 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
NUP188-201ENST00000372577 PLEKP08567 350 aaPredicted RBP11□□□□□ -0.65
NUP188-201ENST00000372577 DSG3P32926 999 aa11□□□□□ -0.65
NUP188-201ENST00000372577 GRIK1P39086 918 aa11□□□□□ -0.65
NUP188-201ENST00000372577 MORF4L2Q15014 288 aa11□□□□□ -0.65
NUP188-201ENST00000372577 GOLGA7BQ2TAP0 167 aa11□□□□□ -0.65
NUP188-201ENST00000372577 MEI1Q5TIA1 1274 aa11□□□□□ -0.65
NUP188-201ENST00000372577 GJB7Q6PEY0 223 aa11□□□□□ -0.65
NUP188-201ENST00000372577 LRRC71Q8N4P6 559 aa11□□□□□ -0.65
NUP188-201ENST00000372577 CCT8L2Q96SF2 557 aa11□□□□□ -0.65
NUP188-201ENST00000372577 XAB2Q9HCS7 855 aaKnown RBP11□□□□□ -0.65
NUP188-201ENST00000372577 AKAP3O75969 853 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 ITGA8P53708 1063 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 TSTA3Q13630 321 aaPredicted RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 R3HDM1Q15032 1099 aaKnown RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 PDK2Q15119 407 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 KRT80Q6KB66 452 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 METTL7BQ6UX53 244 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 SPATA18Q8TC71 538 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 USP15Q9Y4E8 981 aaPredicted RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 RGS7P49802 495 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 AP2B1P63010 937 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 PGM5Q15124 567 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 APOBEC3HQ6NTF7 200 aaKnown RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 CBWD2Q8IUF1 395 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 CCNJLQ8IV13 435 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 ATPAF2Q8N5M1 289 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 CALML6Q8TD86 181 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 DPP3Q9NY33 737 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 PLSCR1O15162 318 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 CST8O60676 142 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 APRTP07741 180 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 GNL1P36915 607 aaPredicted RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 FDFT1P37268 417 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 SREBF2Q12772 1141 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 ANKMY2Q8IV38 441 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 ST13P4Q8IZP2 240 aaPredicted RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 BTBD6Q96KE9 485 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 MTMR9Q96QG7 549 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 SIK2Q9H0K1 926 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 PABPC3Q9H361 631 aaKnown RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 ETNK1Q9HBU6 452 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 LMCD1Q9NZU5 365 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 ARHGAP20Q9P2F6 1191 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 SIGLEC1Q9BZZ2 1709 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 TCP11X1B4DZS4 312 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 RBP3P10745 1247 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 CXCL9Q07325 125 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 LRRC14Q15048 493 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 PRMT1Q99873 361 aaKnown RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 ZBED2Q9BTP6 218 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 SLC13A1Q9BZW2 595 aa10.99□□□□□ -0.65
NUP188-201ENST00000372577 RANBP17Q9H2T7 1088 aaKnown RBP10.99□□□□□ -0.65
NUP188-201ENST00000372577 E5RI56 91 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 DFFAO00273 331 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 SNRPAP09012 282 aaKnown RBP10.98□□□□□ -0.65
NUP188-201ENST00000372577 WEE2P0C1S8 567 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 C6orf222P0C671 652 aaPredicted RBP10.98□□□□□ -0.65
NUP188-201ENST00000372577 SSTR3P32745 418 aaPredicted RBP10.98□□□□□ -0.65
NUP188-201ENST00000372577 CASP4P49662 377 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 BTNL9Q6UXG8 535 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 OTOP1Q7RTM1 612 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 KLHL11Q9NVR0 708 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 FARP1Q9Y4F1 1045 aaPredicted RBP10.98□□□□□ -0.65
NUP188-201ENST00000372577 SGPL1O95470 568 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 MOCS2O96007 188 aaPredicted RBP10.98□□□□□ -0.65
NUP188-201ENST00000372577 RPSAP08865 295 aaKnown RBP10.98□□□□□ -0.65
NUP188-201ENST00000372577 SPRP35270 261 aaPredicted RBP10.98□□□□□ -0.65
NUP188-201ENST00000372577 KDM7AQ6ZMT4 941 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 ZKSCAN4Q969J2 545 aaPredicted RBP10.98□□□□□ -0.65
NUP188-201ENST00000372577 CBWD1Q9BRT8 395 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 PI4K2AQ9BTU6 479 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 TRIM4Q9C037 500 aa10.98□□□□□ -0.65
NUP188-201ENST00000372577 METTL5Q9NRN9 209 aaKnown RBP10.98□□□□□ -0.65
NUP188-201ENST00000372577 DCTN4Q9UJW0 460 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms