RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 LRRK2Q5S007 2527 aa8.72□□□□□ -1.01
YIPF3-201ENST00000372417 FAM149AA5PLN7 773 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 OTOL1A6NHN0 477 aaPredicted RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 CCDC69A6NI79 296 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 H7C4K7 107 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 hCG_1984214I3L0E3 225 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 MSH4O15457 936 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 AP5Z1O43299 807 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 TLX3O43711 291 aaPredicted RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 CBFA2T3O75081 653 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 HLA-EP13747 358 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 IL12RB1P42701 662 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 ANTXR2P58335 489 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 PTENP60484 403 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 CXADRP78310 365 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 PLD1Q13393 1074 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 NBR1Q14596 966 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 AMHR2Q16671 573 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 TRIM68Q6AZZ1 485 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 NFXL1Q6ZNB6 911 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 FERMT3Q86UX7 667 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 CDR2LQ86X02 465 aaPredicted RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 FMNL3Q8IVF7 1028 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 ZNF713Q8N859 430 aaPredicted RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 CCDC26Q8TAB7 109 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 WHAMMQ8TF30 809 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 SETD7Q8WTS6 366 aaKnown RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 BAP1Q92560 729 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 LENG9Q96B70 501 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 NXPE2Q96DL1 559 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 RIT2Q99578 217 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 FAM83CQ9BQN1 747 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 POLR3CQ9BUI4 534 aaPredicted RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 LRRC3Q9BY71 257 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 ATXN3LQ9H3M9 355 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 BMP2KQ9NSY1 1161 aaPredicted RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 NXF1Q9UBU9 619 aaKnown RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 AFF4Q9UHB7 1163 aaKnown RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 PCOLCE2Q9UKZ9 415 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 MAFFQ9ULX9 164 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 YIPF1Q9Y548 306 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 U3KPZ7 1027 aaPredicted RBP8.71□□□□□ -1.02
YIPF3-201ENST00000372417 CNTNAP5Q8WYK1 1306 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 C2CD3Q4AC94 2353 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 BOD1L1Q8NFC6 3051 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 BSNQ9UPA5 3926 aa8.71□□□□□ -1.02
YIPF3-201ENST00000372417 HIP1O00291 1037 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 C6P13671 934 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 IGFBP6P24592 240 aaPredicted RBP8.7□□□□□ -1.02
YIPF3-201ENST00000372417 WEE1P30291 646 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 CIITAP33076 1130 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 RFC5P40937 340 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 BRCC3P46736 316 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 CLCNKBP51801 687 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 NPEPPSP55786 919 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 MBTD1Q05BQ5 628 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 BYSLQ13895 437 aaKnown RBP8.7□□□□□ -1.02
YIPF3-201ENST00000372417 C2orf27AQ580R0 203 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 NAIF1Q69YI7 327 aaPredicted RBP8.7□□□□□ -1.02
YIPF3-201ENST00000372417 CASC1Q6TDU7 716 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 RAB11FIP4Q86YS3 637 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 FRMD1Q8N878 549 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 SPIRE2Q8WWL2 714 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 EZH1Q92800 747 aaPredicted RBP8.7□□□□□ -1.02
YIPF3-201ENST00000372417 SLC5A5Q92911 643 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 CD101Q93033 1021 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 CEP170P1Q96L14 293 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 UROC1Q96N76 676 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 TBC1D32Q96NH3 1257 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 SEMA4CQ9C0C4 833 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 DHX33Q9H6R0 707 aaKnown RBP8.7□□□□□ -1.02
YIPF3-201ENST00000372417 TOR4AQ9NXH8 423 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 KCNK4Q9NYG8 393 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 BCCIPQ9P287 314 aaKnown RBP eCLIP8.7□□□□□ -1.02
YIPF3-201ENST00000372417 IL17BQ9UHF5 180 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 FBXL5Q9UKA1 691 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 MMP17Q9ULZ9 603 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 PPME1Q9Y570 386 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 KNL1Q8NG31 2342 aa8.7□□□□□ -1.02
YIPF3-201ENST00000372417 GOLGA8CPA6NN73 597 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 ENO4A6NNW6 628 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 E7EWF7 191 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 PLK4O00444 970 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 SYN3O14994 580 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 TBX3O15119 743 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 B4GALT5O43286 388 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 RECQL4O94761 1208 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 DKK1O94907 266 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 FGF19O95750 216 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 CYP21A2P08686 494 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 ATXN1LP0C7T5 689 aaKnown RBP8.69□□□□□ -1.02
YIPF3-201ENST00000372417 CPB1P15086 417 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 GABRR2P28476 465 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 GJA4P35212 333 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 EPHB3P54753 998 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 SEC13P55735 322 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 PSMC5P62195 406 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 RHDQ02161 417 aa8.69□□□□□ -1.02
YIPF3-201ENST00000372417 RPL6Q02878 288 aaKnown RBP8.69□□□□□ -1.02
YIPF3-201ENST00000372417 CYP4A11Q02928 519 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms