RNA–Protein interactions for RNA: ENST00000371561.7

GRIN1-208, Transcript of glutamate ionotropic receptor NMDA type subunit 1, human

TSL 1 (best) BASIC

Gene GRIN1, Length 5,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRIN1-208	ENST00000371561	RPAP3	Q9H6T3	665 aa	Predicted RBP	21.32	■■□□□ 1
GRIN1-208	ENST00000371561	PIM2	Q9P1W9	311 aa		21.32	■■□□□ 1
GRIN1-208	ENST00000371561	TAF6L	Q9Y6J9	622 aa		21.32	■■□□□ 1
GRIN1-208	ENST00000371561	KRT8	P05787	483 aa		21.32	■■□□□ 1
GRIN1-208	ENST00000371561	GRIN1	Q05586	938 aa		21.32	■■□□□ 1
GRIN1-208	ENST00000371561	MFN1	Q8IWA4	741 aa		21.32	■■□□□ 1
GRIN1-208	ENST00000371561	STX19	Q8N4C7	294 aa		21.32	■■□□□ 1
GRIN1-208	ENST00000371561	SCFD2	Q8WU76	684 aa		21.32	■■□□□ 1
GRIN1-208	ENST00000371561	ZNF512B	Q96KM6	892 aa	Predicted RBP	21.32	■■□□□ 1
GRIN1-208	ENST00000371561	SENP2	Q9HC62	589 aa		21.32	■■□□□ 1
GRIN1-208	ENST00000371561	ATP11B	Q9Y2G3	1177 aa		21.32	■■□□□ 1
GRIN1-208	ENST00000371561	TBC1D4	O60343	1298 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	S100A5	P33763	92 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	MMP19	Q99542	508 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	FLT1	P17948	1338 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	CPB1	P15086	417 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	CACNB2	Q08289	660 aa	Predicted RBP	21.31	■■□□□ 1
GRIN1-208	ENST00000371561	KCNV1	Q6PIU1	500 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	C3orf20	Q8ND61	904 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	TPCN2	Q8NHX9	752 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	GTF3C4	Q9UKN8	822 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	PAIP2B	Q9ULR5	123 aa	Known RBP	21.31	■■□□□ 1
GRIN1-208	ENST00000371561	DAGLA	Q9Y4D2	1042 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	CNTNAP5	Q8WYK1	1306 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	MAPK7	Q13164	816 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	SPDYA	Q5MJ70	313 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	USP33	Q8TEY7	942 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	FAM95C	A0A1B0GW59	222 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	WDR47	O94967	919 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	CCDC159	P0C7I6	412 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	ZNF677	Q86XU0	584 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	PPIL6	Q8IXY8	311 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	CASKIN2	Q8WXE0	1202 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	NSMCE4A	Q9NXX6	385 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	FAM32A	Q9Y421	112 aa	Known RBP	21.31	■■□□□ 1
GRIN1-208	ENST00000371561	CFAP74	Q9C0B2	1584 aa		21.31	■■□□□ 1
GRIN1-208	ENST00000371561	CDC42BPG	Q6DT37	1551 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	CAND2	O75155	1236 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	ACADS	P16219	412 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	DDX5	P17844	614 aa	Known RBP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	FXR2	P51116	673 aa	Known RBP eCLIP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	CHI3L2	Q15782	390 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	ANO4	Q32M45	955 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	ATPAF2	Q8N5M1	289 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	VPS33B	Q9H267	617 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	NYAP2	Q9P242	653 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	NAGPA	Q9UK23	515 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	NRK	Q7Z2Y5	1582 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	LRRC7	Q96NW7	1537 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	H2AFX	P16104	143 aa	Predicted RBP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	HIST1H2AD	P20671	130 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	GEMIN4	P57678	1058 aa	Known RBP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	HIST1H2AH	Q96KK5	128 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	HIST1H2AJ	Q99878	128 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	H2AFJ	Q9BTM1	129 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	FRMD8	Q9BZ67	464 aa	Predicted RBP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	TTC30B	Q8N4P2	665 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	SH3TC2	Q8TF17	1288 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	HNRNPR	O43390	633 aa	Known RBP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	NLRP11	P59045	1033 aa	Known RBP	21.3	■■□□□ 1
GRIN1-208	ENST00000371561	ERVK-24	P63145	666 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	TMEM132D	Q14C87	1099 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	PDK1	Q15118	436 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	CLEC10A	Q8IUN9	316 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	SP8	Q8IXZ3	490 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	ELMOD1	Q8N336	334 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	SHCBP1	Q8NEM2	672 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	FEZF2	Q8TBJ5	459 aa		21.3	■■□□□ 1
GRIN1-208	ENST00000371561	TARBP1	Q13395	1621 aa	Known RBP	21.29	■■□□□ 1
GRIN1-208	ENST00000371561	GRAP2	O75791	330 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	PLEK	P08567	350 aa	Predicted RBP	21.29	■■□□□ 1
GRIN1-208	ENST00000371561	KCTD17	Q8N5Z5	321 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	L1RE1	Q9UN81	338 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561		A0A087X0T9	212 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	TRIM49D1	C9J1S8	452 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561		M0R3G1	203 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	NDUFS3	O75489	264 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	FAM228B	P0C875	321 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	BAAT	Q14032	418 aa	Predicted RBP	21.29	■■□□□ 1
GRIN1-208	ENST00000371561	APPL2	Q8NEU8	664 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	PRPF18	Q99633	342 aa	Known RBP	21.29	■■□□□ 1
GRIN1-208	ENST00000371561	ASB14	A6NK59	587 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	PDHB	P11177	359 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	BRINP3	Q76B58	766 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	CALML6	Q8TD86	181 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	GID8	Q9NWU2	228 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	ATF5	Q9Y2D1	282 aa	Predicted RBP	21.29	■■□□□ 1
GRIN1-208	ENST00000371561	TXN	P10599	105 aa	Known RBP	21.29	■■□□□ 1
GRIN1-208	ENST00000371561	AASDH	Q4L235	1098 aa	Predicted RBP	21.29	■■□□□ 1
GRIN1-208	ENST00000371561	KCNB2	Q92953	911 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	TMEM161A	Q9NX61	479 aa		21.29	■■□□□ 1
GRIN1-208	ENST00000371561	EEF2K	O00418	725 aa	Known RBP	21.28	■■□□□ 1
GRIN1-208	ENST00000371561	SNRPF	P62306	86 aa	Known RBP	21.28	■■□□□ 1
GRIN1-208	ENST00000371561	BTK	Q06187	659 aa		21.28	■■□□□ 1
GRIN1-208	ENST00000371561	KIZ	Q2M2Z5	673 aa		21.28	■■□□□ 1
GRIN1-208	ENST00000371561	MROH9	Q5TGP6	573 aa		21.28	■■□□□ 1
GRIN1-208	ENST00000371561	OLFML2B	Q68BL8	750 aa		21.28	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms