RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 HOXC6P09630 235 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 NR1D1P20393 614 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 GCLCP48506 637 aaPredicted RBP13.63□□□□□ -0.23
GPC3-201ENST00000370818 AP3M2P53677 418 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 IGBP1P78318 339 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 CENPCQ03188 943 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 LINC01465Q8N7H1 131 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 UBR7Q8N806 425 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 SLITRK6Q9H5Y7 841 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 SPATS2LQ9NUQ6 558 aaKnown RBP13.63□□□□□ -0.23
GPC3-201ENST00000370818 E7EVH7 732 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 ZNF286BP0CG31 522 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 RRM1P23921 792 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 XRCC4Q13426 336 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 ZNF568Q3ZCX4 644 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 C2CD6Q53TS8 623 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 ANKRD20A8PQ5CZ79 823 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 ADAT2Q7Z6V5 191 aaKnown RBP13.63□□□□□ -0.23
GPC3-201ENST00000370818 ZNF467Q7Z7K2 595 aaPredicted RBP13.63□□□□□ -0.23
GPC3-201ENST00000370818 THNSL1Q8IYQ7 743 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 UBL4BQ8N7F7 174 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 RBBP8NLQ8NC74 664 aaPredicted RBP13.63□□□□□ -0.23
GPC3-201ENST00000370818 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
GPC3-201ENST00000370818 C16orf70Q9BSU1 422 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 NFKBIZQ9BYH8 718 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 CELF4Q9BZC1 486 aaKnown RBP13.63□□□□□ -0.23
GPC3-201ENST00000370818 TRIM7Q9C029 511 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 WNT8AQ9H1J5 351 aa13.63□□□□□ -0.23
GPC3-201ENST00000370818 ASAP2O43150 1006 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 TTI1O43156 1089 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 CSDE1O75534 798 aaKnown RBP13.62□□□□□ -0.23
GPC3-201ENST00000370818 GNA15P30679 374 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 CTNNA1P35221 906 aaKnown RBP13.62□□□□□ -0.23
GPC3-201ENST00000370818 ZNF132P52740 706 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 MYL6P60660 151 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 IFFO1Q0D2I5 559 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 ZNF484Q5JVG2 852 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 MON1BQ7L1V2 547 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 GPR142Q7Z601 462 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 ZDHHC14Q8IZN3 488 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 SPDL1Q96EA4 605 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 PTPN18Q99952 460 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 GBA2Q9HCG7 927 aaPredicted RBP13.62□□□□□ -0.23
GPC3-201ENST00000370818 AVENQ9NQS1 362 aaPredicted RBP13.62□□□□□ -0.23
GPC3-201ENST00000370818 IVNS1ABPQ9Y6Y0 642 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 MROH7Q68CQ1 1323 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 PYGMP11217 842 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 OSTNP61366 133 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 NOMO3P69849 1222 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 DUOXA2Q1HG44 320 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 AP1ARQ63HQ0 302 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 DDX42Q86XP3 938 aaKnown RBP eCLIP13.62□□□□□ -0.23
GPC3-201ENST00000370818 PASD1Q8IV76 773 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 TMEM192Q8IY95 271 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 EIF1ADQ8N9N8 165 aaKnown RBP13.62□□□□□ -0.23
GPC3-201ENST00000370818 RSRC1Q96IZ7 334 aaKnown RBP13.62□□□□□ -0.23
GPC3-201ENST00000370818 NAP1L3Q99457 506 aaPredicted RBP13.62□□□□□ -0.23
GPC3-201ENST00000370818 IMPG2Q9BZV3 1241 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 CDT1Q9H211 546 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 BATF3Q9NR55 127 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 TNFSF13BQ9Y275 285 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 PCDHA3Q9Y5H8 950 aa13.62□□□□□ -0.23
GPC3-201ENST00000370818 PLXNB2O15031 1838 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 SPOPO43791 374 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 CTNNA2P26232 953 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 SSTR3P32745 418 aaPredicted RBP13.61□□□□□ -0.23
GPC3-201ENST00000370818 NSFP46459 744 aaKnown RBP13.61□□□□□ -0.23
GPC3-201ENST00000370818 SCTRP47872 440 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 GUCY2FP51841 1108 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 FKBP1BP68106 108 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 GRB14Q14449 540 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 AMHR2Q16671 573 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 CFAP58Q5T655 872 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 MAATS1Q7Z4T9 603 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 PHLDB2Q86SQ0 1253 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 CD302Q8IX05 232 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 CCDC26Q8TAB7 109 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 PIK3R5Q8WYR1 880 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 SEC14L1Q92503 715 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 XYLT2Q9H1B5 865 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 ETAA1Q9NY74 926 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 ANAPC7Q9UJX3 599 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 GPR25O00155 361 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 B4GALT4O60513 344 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 MYBL1P10243 752 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 TFAMQ00059 246 aaKnown RBP13.61□□□□□ -0.23
GPC3-201ENST00000370818 POU5F1BQ06416 359 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 CUL1Q13616 776 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 SURF1Q15526 300 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 LACTB2Q53H82 288 aaPredicted RBP13.61□□□□□ -0.23
GPC3-201ENST00000370818 SPRYD7Q5W111 196 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 MAML3Q96JK9 1138 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 NEUROG2Q9H2A3 272 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 PPANQ9NQ55 473 aaKnown RBP13.61□□□□□ -0.23
GPC3-201ENST00000370818 PLXNA1Q9UIW2 1896 aa13.61□□□□□ -0.23
GPC3-201ENST00000370818 A0A087WZ62 844 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 CLSTN1O94985 981 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 SMPD1P17405 629 aa13.6□□□□□ -0.23
GPC3-201ENST00000370818 MREGQ8N565 214 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms