RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 PEX3P56589 373 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 RAB33AQ14088 237 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 UPP1Q16831 310 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 FAM171A1Q5VUB5 890 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 CWF19L1Q69YN2 538 aaKnown RBP16.14■□□□□ 0.17
LMO4-201ENST00000370542 SPATA31D4Q6ZUB0 917 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 RTL10Q7L3V2 364 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 APBB1IPQ7Z5R6 666 aaPredicted RBP16.14■□□□□ 0.17
LMO4-201ENST00000370542 SPIRE2Q8WWL2 714 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 DRC1Q96MC2 740 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 UROC1Q96N76 676 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 RUSC1Q9BVN2 902 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 CDT1Q9H211 546 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.14■□□□□ 0.175e-7■■■■□ 26.1
LMO4-201ENST00000370542 GDAQ9Y2T3 454 aa16.14■□□□□ 0.17
LMO4-201ENST00000370542 CEP250Q9BV73 2442 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 SMIM28A0A1B0GU29 152 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 ANHXE9PGG2 379 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 MAP2K7O14733 419 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 HNRNPA1P09651 372 aaKnown RBP eCLIP16.13■□□□□ 0.17
LMO4-201ENST00000370542 COL9A2Q14055 689 aaPredicted RBP16.13■□□□□ 0.17
LMO4-201ENST00000370542 PSMD5Q16401 504 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 TMEM132AQ24JP5 1023 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 ARL6IP4Q66PJ3 421 aaKnown RBP16.13■□□□□ 0.17
LMO4-201ENST00000370542 CEP120Q8N960 986 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 SYT2Q8N9I0 419 aaPredicted RBP16.13■□□□□ 0.17
LMO4-201ENST00000370542 TRIML1Q8N9V2 468 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 HASPINQ8TF76 798 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 CCDC34Q96HJ3 373 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 PNMA5Q96PV4 448 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 BAG1Q99933 345 aaPredicted RBP16.13■□□□□ 0.17
LMO4-201ENST00000370542 FUT8Q9BYC5 575 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 MRPL4Q9BYD3 311 aaKnown RBP16.13■□□□□ 0.17
LMO4-201ENST00000370542 ST7Q9NRC1 585 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 KCND2Q9NZV8 630 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 WNT16Q9UBV4 365 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 KCNG1Q9UIX4 513 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 BACE2Q9Y5Z0 518 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 ZFP37Q9Y6Q3 630 aaPredicted RBP16.13■□□□□ 0.17
LMO4-201ENST00000370542 USP24Q9UPU5 2620 aa16.13■□□□□ 0.17
LMO4-201ENST00000370542 MEFVO15553 781 aaPredicted RBP16.12■□□□□ 0.17
LMO4-201ENST00000370542 ADAM12O43184 909 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 MCF2P10911 925 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 LAMP2P13473 410 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 KCNE1P15382 129 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 AOC1P19801 751 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 CLCNKBP51801 687 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 GNG11P61952 73 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 TBX2Q13207 712 aaPredicted RBP16.12■□□□□ 0.17
LMO4-201ENST00000370542 DMP1Q13316 513 aaPredicted RBP16.12■□□□□ 0.17
LMO4-201ENST00000370542 SLC44A3Q8N4M1 653 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 C3orf58Q8NDZ4 430 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 SMARCE1Q969G3 411 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 KMT5AQ9NQR1 393 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 MTRRQ9UBK8 725 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 RAB21Q9UL25 225 aa16.12■□□□□ 0.17
LMO4-201ENST00000370542 NOTCH4Q99466 2003 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 A0A1B0GVL5 298 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 VWA3AA6NCI4 1184 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 CCDC169A6NNP5 214 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 MYO1CO00159 1063 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 SLC26A4O43511 780 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 TBC1D4O60343 1298 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 B3GAT3O94766 335 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 SYKP43405 635 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 SLC12A3P55017 1021 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 SOX4Q06945 474 aaPredicted RBP16.11■□□□□ 0.17
LMO4-201ENST00000370542 SLC39A14Q15043 492 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 ANGPT1Q15389 498 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 GLRA4Q5JXX5 417 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 RSPO2Q6UXX9 243 aaPredicted RBP16.11■□□□□ 0.17
LMO4-201ENST00000370542 SRLQ86TD4 932 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 GLYCTKQ8IVS8 523 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 MSANTD4Q8NCY6 345 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 TMEM161BQ8NDZ6 487 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 RSAD2Q8WXG1 361 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 DDX27Q96GQ7 796 aaKnown RBP16.11■□□□□ 0.17
LMO4-201ENST00000370542 ZMAT2Q96NC0 199 aaKnown RBP16.11■□□□□ 0.17
LMO4-201ENST00000370542 TARS2Q9BW92 718 aaKnown RBP16.11■□□□□ 0.17
LMO4-201ENST00000370542 MED4Q9NPJ6 270 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 TOPORSQ9NS56 1045 aaPredicted RBP16.11■□□□□ 0.17
LMO4-201ENST00000370542 CNTN3Q9P232 1028 aa16.11■□□□□ 0.17
LMO4-201ENST00000370542 NARSO43776 548 aaKnown RBP16.1■□□□□ 0.17
LMO4-201ENST00000370542 CUTAO60888 179 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 C8AP07357 584 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 MYBP10242 640 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 SRFP11831 508 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 GBP2P32456 591 aaPredicted RBP16.1■□□□□ 0.17
LMO4-201ENST00000370542 MAGEA9P43362 315 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 HTR4Q13639 388 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 MRPL58Q14197 206 aaKnown RBP16.1■□□□□ 0.17
LMO4-201ENST00000370542 LONRF2Q1L5Z9 754 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 ZNF568Q3ZCX4 644 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 TMEM119Q4V9L6 283 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 HSP90B2PQ58FF3 399 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 MPZL3Q6UWV2 235 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 CEP57Q86XR8 500 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 CCDC105Q8IYK2 499 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 MLKLQ8NB16 471 aa16.1■□□□□ 0.17
LMO4-201ENST00000370542 NEK11Q8NG66 645 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms