RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CNTFP26441 200 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PMLP29590 882 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ZAP70P43403 619 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 RPIAP49247 311 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 EXOSC9Q06265 439 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 STRN3Q13033 797 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 GRB14Q14449 540 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PUM1Q14671 1186 aaKnown RBP eCLIP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PPP1R15BQ5SWA1 713 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 NCAPH2Q6IBW4 605 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 RAB12Q6IQ22 244 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 NEPROQ6NW34 567 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ZNF600Q6ZNG1 722 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PLEKHH3Q7Z736 793 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 NOSTRINQ8IVI9 506 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC13Q8IYE1 715 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 RUFY2Q8WXA3 655 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ITPKCQ96DU7 683 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 MTMR9Q96QG7 549 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC106Q9BWC9 280 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 APOL5Q9BWW9 433 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 MMRN2Q9H8L6 949 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CLK4Q9HAZ1 481 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 NDUFA13Q9P0J0 144 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 MALT1Q9UDY8 824 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SAP30BPQ9UHR5 308 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PCDHB8Q9UN66 801 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 NOD1Q9Y239 953 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ZNF711Q9Y462 761 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 FOCADQ5VW36 1801 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SFI1A8K8P3 1242 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PHF20L1A8MW92 1017 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 TTC34A8MYJ7 566 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 C9IYK1 514 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 BUB1BO60566 1050 aaPredicted RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 DIAPH2O60879 1101 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CNOT4O95628 575 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 BAG3O95817 575 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 GSTA1P08263 222 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 MX2P20592 715 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ANXA13P27216 316 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ADH7P40394 386 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CRKP46108 304 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 TUBP50607 506 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CDK7P50613 346 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PPARDQ03181 441 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 DSC3Q14574 896 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 TEAD4Q15561 434 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ADRM1Q16186 407 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 TIGD5Q53EQ6 642 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 C6orf89Q6UWU4 347 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 KDELC2Q7Z4H8 507 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 FAM228AQ86W67 206 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PPFIBP1Q86W92 1011 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 FAM186BQ8IYM0 893 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SYCP3Q8IZU3 236 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PLD6Q8N2A8 252 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 CRACR2BQ8N4Y2 399 aaPredicted RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 STKLD1Q8NE28 680 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 GPRC5AQ8NFJ5 357 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 TTC17Q96AE7 1141 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 TNIP3Q96KP6 325 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PRMT6Q96LA8 375 aaPredicted RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 WRNIP1Q96S55 665 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 SEC62Q99442 399 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PUS3Q9BZE2 481 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 TRIM5Q9C035 493 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 YIPF3Q9GZM5 350 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 ZBTB3Q9H5J0 574 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 EPHX3Q9H6B9 360 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 DNAJC18Q9H819 358 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 FBRSQ9HAH7 460 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 AAASQ9NRG9 546 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 KLHL11Q9NVR0 708 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 EPS15L1Q9UBC2 864 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 PPARGC1AQ9UBK2 798 aaKnown RBP5.39□□□□□ -1.55
UBE3D-202ENST00000369746 MTCH2Q9Y6C9 303 aa5.39□□□□□ -1.55
UBE3D-202ENST00000369746 TANC1Q9C0D5 1861 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 SYNJ2BP-COX16A0A087WUM0 186 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CFAP73A6NFT4 308 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC69A6NI79 296 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 GOLGA8KD6RF30 607 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 UBXN8O00124 270 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 THAP12O43422 761 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 TSPAN1O60635 241 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 RNF40O75150 1001 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 FLOT1O75955 427 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 ALDH2P05091 517 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CYP11A1P05108 521 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 ATP5BP06576 529 aaKnown RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 THEGLP0DJG4 465 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 PTPRAP18433 802 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 STAT1P42224 750 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 ASMTP46597 345 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 SCNN1BP51168 640 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 PMS2P54278 862 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 PDE1BQ01064 536 aa5.38□□□□□ -1.55
UBE3D-202ENST00000369746 MVPQ14764 893 aaKnown RBP5.38□□□□□ -1.55
UBE3D-202ENST00000369746 CASP8Q14790 479 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms