RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 PIK3AP1Q6ZUJ8 805 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 TRAPPC11Q7Z392 1133 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 TMCO2Q7Z6W1 182 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-204ENST00000369530 MREGQ8N565 214 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 CHFRQ96EP1 664 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 FAM167AQ96KS9 214 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 LXNQ9BS40 222 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 TIPINQ9BVW5 301 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 PCMTD2Q9NV79 361 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 HCSTQ9UBK5 93 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 ATP8A1Q9Y2Q0 1164 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 LRP4O75096 1905 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC194A0A1B0GVG4 234 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 CREB3O43889 395 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 MCM7P33993 719 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 ATN1P54259 1190 aaPredicted RBP7.36□□□□□ -1.23
CSDE1-204ENST00000369530 MRPS35P82673 323 aaKnown RBP7.36□□□□□ -1.23
CSDE1-204ENST00000369530 SULT2A1Q06520 285 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 MCL1Q07820 350 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 HYAL1Q12794 435 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 GIT2Q14161 759 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 TTMPQ5BVD1 217 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 PPP1R15BQ5SWA1 713 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 RNF43Q68DV7 783 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 RINT1Q6NUQ1 792 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 USP49Q70CQ1 688 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 NLRP14Q86W24 1093 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC51Q96ER9 411 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 DYDC2Q96IM9 177 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 MED15Q96RN5 788 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 MPHOSPH6Q99547 160 aaKnown RBP7.36□□□□□ -1.23
CSDE1-204ENST00000369530 UBE2OQ9C0C9 1292 aaKnown RBP7.36□□□□□ -1.23
CSDE1-204ENST00000369530 ZNF576Q9H609 170 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 C1orf112Q9NSG2 853 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 GABBR1Q9UBS5 961 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 TUBGCP4Q9UGJ1 667 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 YEATS4O95619 227 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 ANP32DO95626 131 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 RB1P06400 928 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 CYP11B2P19099 503 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 PAX3P23760 479 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 AFMP43652 599 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 UBE3AQ05086 875 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 LAMTOR4Q0VGL1 99 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 SLC39A14Q15043 492 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 RESP18Q5W5W9 173 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 TOGARAM2Q6ZUX3 1019 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC80Q76M96 950 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 CEP57Q86XR8 500 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 C12orf56Q8IXR9 622 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 UBR7Q8N806 425 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 ERMNQ8TAM6 284 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 TEKT3Q9BXF9 490 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 BRD8Q9H0E9 1235 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 MRPL44Q9H9J2 332 aaKnown RBP7.36□□□□□ -1.23
CSDE1-204ENST00000369530 INTS13Q9NVM9 706 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 CEP131Q9UPN4 1083 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 ADGRG1Q9Y653 693 aa7.36□□□□□ -1.23
CSDE1-204ENST00000369530 NCANO14594 1321 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 ITGB1P05556 798 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 PFKFB1P16118 471 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 CCND1P24385 295 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 IFT88Q13099 833 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 EPC2Q52LR7 807 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 PRR16Q569H4 304 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 MYOCDQ8IZQ8 938 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 ATP6V0A1Q93050 837 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 STAMBPL1Q96FJ0 436 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 ASIC4Q96FT7 647 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 AK8Q96MA6 479 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 CCT8L2Q96SF2 557 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC28BQ9BUN5 200 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 SELENOOQ9BVL4 669 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 RUSC1Q9BVN2 902 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 CD320Q9NPF0 282 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 DMAP1Q9NPF5 467 aaPredicted RBP7.35□□□□□ -1.23
CSDE1-204ENST00000369530 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.35□□□□□ -1.23
CSDE1-204ENST00000369530 KIAA1468Q9P260 1216 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 BDP1A6H8Y1 2624 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 PI4K2BG5E9Z4 385 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 ARNTLO00327 626 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 TLR3O15455 904 aaKnown RBP7.35□□□□□ -1.23
CSDE1-204ENST00000369530 PHACTR2O75167 634 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 TBX10O75333 385 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 CCDC175P0C221 793 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 VDRP11473 427 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 RABGGTBP53611 331 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 USP4Q13107 963 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 RILPL1Q5EBL4 403 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 KRI1Q8N9T8 703 aaKnown RBP7.35□□□□□ -1.23
CSDE1-204ENST00000369530 MRPL38Q96DV4 380 aaKnown RBP7.35□□□□□ -1.23
CSDE1-204ENST00000369530 RTP3Q9BQQ7 232 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 C17orf75Q9HAS0 396 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 PCDH18Q9HCL0 1135 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 ST3GAL5Q9UNP4 418 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 PLAGL2Q9UPG8 496 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 SAMM50Q9Y512 469 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 CTAGE9A4FU28 777 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 POTEMA6NI47 508 aa7.35□□□□□ -1.23
CSDE1-204ENST00000369530 ATP6V1G1O75348 118 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms