RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 HEPHQ9BQS7 1158 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CCDC177Q9NQR7 707 aaPredicted RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 DUSP10Q9Y6W6 482 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CPSF1Q10570 1443 aaKnown RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 NPHP3-ACAD11A0A0J9YXS1 232 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 M0QX08 132 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 LPXNO60711 386 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 AFPP02771 609 aaKnown RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 HOXD11P31277 338 aaPredicted RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 SLC5A3P53794 718 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 GJA9P57773 515 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 C4orf22Q6V702 233 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 TMEM139Q8IV31 216 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 PI4K2BQ8TCG2 481 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 ALKBH8Q96BT7 664 aaKnown RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CGREF1Q99674 301 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CELF4Q9BZC1 486 aaKnown RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 MAGEF1Q9HAY2 307 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CEP72Q9P209 647 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 NKX1-2Q9UD57 310 aaPredicted RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 STARD13Q9Y3M8 1113 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 H3BNX3 289 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 SRGNP10124 158 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 COPAP53621 1224 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CTSWP56202 376 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 SLC25A41Q8N5S1 370 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 ZNF507Q8TCN5 953 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 PBXIP1Q96AQ6 731 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 C17orf80Q9BSJ5 609 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 TEX13BQ9BXU2 312 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 AGPAT5Q9NUQ2 364 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 SQORQ9Y6N5 450 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 PPRC1Q5VV67 1664 aaKnown RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 A0A1W2PRG6 482 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CENPBD1B2RD01 187 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 VCLP18206 1134 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CCNG1P51959 295 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 SCARA3Q6AZY7 606 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 RWDD4Q6NW29 188 aaKnown RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 AAGABQ6PD74 315 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 KLHDC10Q6PID8 442 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CCDC81Q6ZN84 652 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 CYP2U1Q7Z449 544 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 FNIP1Q8TF40 1166 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 RSPH9Q9H1X1 276 aaPredicted RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 STOML2Q9UJZ1 356 aa10.91□□□□□ -0.66
PRDM1-201ENST00000369089 SCAF8Q9UPN6 1271 aaKnown RBP10.91□□□□□ -0.66
PRDM1-201ENST00000369089 MROH5Q6ZUA9 1318 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 SAC3D1A6NKF1 404 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 GGPS1O95749 300 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 PABPC4LP0CB38 370 aaKnown RBP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 RARGP13631 454 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 PIK3CAP42336 1068 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 LRP8Q14114 963 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 EFTUD2Q15029 972 aaKnown RBP eCLIP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 KLHL38Q2WGJ6 581 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 ATAD3BQ5T9A4 648 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 KLHL35Q6PF15 583 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 LVRNQ6Q4G3 990 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 PRR23BQ6ZRT6 265 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 S100ZQ8WXG8 99 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 SNF8Q96H20 258 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 BTBD6Q96KE9 485 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 TMEM79Q9BSE2 394 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 WDR12Q9GZL7 423 aaKnown RBP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 MANSC1Q9H8J5 431 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 CCDC59Q9P031 241 aaKnown RBP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 AXIN2Q9Y2T1 843 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 INO80Q9ULG1 1556 aaPredicted RBP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 MYPNQ86TC9 1320 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 LRRIQ4A6NIV6 560 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 ZC3H11AO75152 810 aaKnown RBP eCLIP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 RAG1P15918 1043 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 MMP13P45452 471 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 TMEM62Q0P6H9 643 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 MSLNQ13421 630 aaPredicted RBP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 RASA2Q15283 850 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 LETM2Q2VYF4 491 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 ZBED8Q8IZ13 594 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 C4orf33Q8N1A6 199 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 FITM2Q8N6M3 262 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 MINDY2Q8NBR6 621 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 NEDD1Q8NHV4 660 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 CYGBQ8WWM9 190 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 DHX36Q9H2U1 1008 aaKnown RBP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 TPK1Q9H3S4 243 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 PPCSQ9HAB8 311 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 AGTPBP1Q9UPW5 1226 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 GDAQ9Y2T3 454 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 FAM32AQ9Y421 112 aaKnown RBP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 ZNF532Q9HCE3 1301 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 TMCC2O75069 709 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 TSC22D2O75157 780 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 CCNKO75909 580 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 XRCC5P13010 732 aaKnown RBP10.9□□□□□ -0.66
PRDM1-201ENST00000369089 C16orf89Q6UX73 402 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 ISLR2Q6UXK2 745 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 TTC30BQ8N4P2 665 aa10.9□□□□□ -0.66
PRDM1-201ENST00000369089 SUPT20HQ8NEM7 779 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms