RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 SYDE2Q5VT97 1194 aa18.9■□□□□ 0.62
CHTOP-201ENST00000368686 KLHDC10Q6PID8 442 aa18.9■□□□□ 0.62
CHTOP-201ENST00000368686 NCCRP1Q6ZVX7 275 aaPredicted RBP18.9■□□□□ 0.62
CHTOP-201ENST00000368686 RBM15BQ8NDT2 890 aaKnown RBP18.9■□□□□ 0.62
CHTOP-201ENST00000368686 MKL1Q969V6 931 aa18.9■□□□□ 0.62
CHTOP-201ENST00000368686 BTBD6Q96KE9 485 aa18.9■□□□□ 0.62
CHTOP-201ENST00000368686 POLIQ9UNA4 740 aa18.9■□□□□ 0.62
CHTOP-201ENST00000368686 MYO3BQ8WXR4 1341 aa18.9■□□□□ 0.62
CHTOP-201ENST00000368686 RBM47A0AV96 593 aaKnown RBP18.89■□□□□ 0.61
CHTOP-201ENST00000368686 MED24O75448 989 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 E2F6O75461 281 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 CAMTA2O94983 1202 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 SMIM18P0DKX4 95 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 TBL3Q12788 808 aaKnown RBP18.89■□□□□ 0.61
CHTOP-201ENST00000368686 RASA3Q14644 834 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 SFT2D3Q587I9 215 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 UGT2A3Q6UWM9 527 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 ZNF804AQ7Z570 1209 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 TTC7BQ86TV6 843 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 SNRNP27Q8WVK2 155 aaKnown RBP18.89■□□□□ 0.61
CHTOP-201ENST00000368686 SETDB2Q96T68 719 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 S100A14Q9HCY8 104 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 EML1O00423 815 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 BIRC5O15392 142 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 TGFB1I1O43294 461 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 SLC1A1P43005 524 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 CPA2P48052 419 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 GALK1P51570 392 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 MSLNQ13421 630 aaPredicted RBP18.89■□□□□ 0.61
CHTOP-201ENST00000368686 ADRM1Q16186 407 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 SH3D19Q5HYK7 790 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 CC2D2BQ6DHV5 1058 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 ZNF746Q6NUN9 644 aaPredicted RBP18.89■□□□□ 0.61
CHTOP-201ENST00000368686 POTEGQ6S5H5 508 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 ZBED8Q8IZ13 594 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 NUP93Q8N1F7 819 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 COA7Q96BR5 231 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 ALKBH8Q96BT7 664 aaKnown RBP18.89■□□□□ 0.61
CHTOP-201ENST00000368686 MAF1Q9H063 256 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 GTF3C4Q9UKN8 822 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 DMTF1Q9Y222 760 aa18.89■□□□□ 0.61
CHTOP-201ENST00000368686 PGM3O95394 542 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 IL1BP01584 269 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 ARL4CP56559 192 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 PPP1R18Q6NYC8 613 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 PASD1Q8IV76 773 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 ZFRQ96KR1 1074 aaKnown RBP18.88■□□□□ 0.61
CHTOP-201ENST00000368686 BTBD9Q96Q07 612 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 THTPAQ9BU02 230 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 NMUR2Q9GZQ4 415 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 VPS37BQ9H9H4 285 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 ARFGEF1Q9Y6D6 1849 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 ARHGAP10A1A4S6 786 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 CAPN14A8MX76 684 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 SPECC1L-ADORA2AF8WAN1 911 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 CLPTM1O96005 669 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 SUSD4Q5VX71 490 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 TCP10LQ8TDR4 215 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 DDX18Q9NVP1 670 aaKnown RBP18.88■□□□□ 0.61
CHTOP-201ENST00000368686 ARMCX1Q9P291 453 aa18.88■□□□□ 0.61
CHTOP-201ENST00000368686 C15orf38-AP3S2A0A0A6YYH1 394 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 CCDC160A6NGH7 325 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 TBCAO75347 108 aaKnown RBP18.87■□□□□ 0.61
CHTOP-201ENST00000368686 MYL2P10916 166 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 VARSP26640 1264 aaKnown RBP18.87■□□□□ 0.61
CHTOP-201ENST00000368686 CLCN2P51788 898 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 AQP4P55087 323 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 DLG1Q12959 904 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 CCNG2Q16589 344 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 ARPINQ7Z6K5 226 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 FNDC8Q8TC99 324 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 SLC5A5Q92911 643 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 FAM84BQ96KN1 310 aaPredicted RBP18.87■□□□□ 0.61
CHTOP-201ENST00000368686 RBM38Q9H0Z9 239 aaKnown RBP18.87■□□□□ 0.61
CHTOP-201ENST00000368686 PLK2Q9NYY3 685 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 TAGLN3Q9UI15 199 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 ITGB1BP2Q9UKP3 347 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 DNM3Q9UQ16 869 aa18.87■□□□□ 0.61
CHTOP-201ENST00000368686 UBAP1LF5GYI3 381 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 EIF3DO15371 548 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHTOP-201ENST00000368686 ENO1P06733 434 aaKnown RBP18.86■□□□□ 0.61
CHTOP-201ENST00000368686 IRX4P78413 519 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 BTG3Q14201 252 aaPredicted RBP18.86■□□□□ 0.61
CHTOP-201ENST00000368686 PRKD1Q15139 912 aaPredicted RBP18.86■□□□□ 0.61
CHTOP-201ENST00000368686 CCDC92Q53HC0 331 aaPredicted RBP18.86■□□□□ 0.61
CHTOP-201ENST00000368686 CHSY1Q86X52 802 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 PCDHB18PQ96TA0 734 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 SIKE1Q9BRV8 207 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 RUSC1Q9BVN2 902 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 ZNF287Q9HBT7 754 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 FAIMQ9NVQ4 179 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 FETUBQ9UGM5 382 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 ZNF148Q9UQR1 794 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 TELO2Q9Y4R8 837 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 F5H6K3 240 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 TFAP2AP05549 437 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 KLRC2P26717 231 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 CLK2P49760 499 aaKnown RBP18.86■□□□□ 0.61
CHTOP-201ENST00000368686 PSMD7P51665 324 aa18.86■□□□□ 0.61
CHTOP-201ENST00000368686 KCNA1Q09470 495 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms