RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 AKR1B10O60218 316 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 TACC1O75410 805 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 FGBP02675 491 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 CD58P19256 250 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 SCN1AP35498 2009 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 EIF4A3P38919 411 aaKnown RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 WDR5P61964 334 aaKnown RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 BMS1Q14692 1282 aaKnown RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 RAD9BQ6WBX8 426 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 RBBP8NLQ8NC74 664 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 EIF3CQ99613 913 aaKnown RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 SMYD3Q9H7B4 428 aa13.16□□□□□ -0.3
TUBE1-202ENST00000368662 BARX2Q9UMQ3 279 aaPredicted RBP13.16□□□□□ -0.3
TUBE1-202ENST00000368662 CARNS1A5YM72 827 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 TBKBP1A7MCY6 615 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 CILPO75339 1184 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 B3GAT3O94766 335 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 PLEKP08567 350 aaPredicted RBP13.15□□□□□ -0.3
TUBE1-202ENST00000368662 ACRP10323 421 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 CYP11B1P15538 503 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 AARSP49588 968 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBE1-202ENST00000368662 KIF11P52732 1056 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 ZNF132P52740 706 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 KRT83P78385 493 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 ASTE1Q2TB18 679 aaPredicted RBP13.15□□□□□ -0.3
TUBE1-202ENST00000368662 ZNF571Q7Z3V5 609 aaPredicted RBP13.15□□□□□ -0.3
TUBE1-202ENST00000368662 UNC93AQ86WB7 457 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 EPS8L1Q8TE68 723 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
TUBE1-202ENST00000368662 PYCARDQ9ULZ3 195 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 CCDC85CA6NKD9 419 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 SPTLC1O15269 473 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 ZSCAN12O43309 604 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 DGKIO75912 1065 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 UPP2O95045 317 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 LCA5LO95447 670 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 PAEPP09466 180 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 CCDC175P0C221 793 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 GNA15P30679 374 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 SPA17Q15506 151 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 SLC18A3Q16572 532 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 LIMS2Q7Z4I7 341 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 SLC47A2Q86VL8 602 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 ZNF280BQ86YH2 543 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 TMEM86AQ8N2M4 240 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 TXLNBQ8N3L3 684 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 SPATA18Q8TC71 538 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 KIAA1524Q8TCG1 905 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 TMEM175Q9BSA9 504 aa13.15□□□□□ -0.3
TUBE1-202ENST00000368662 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.15□□□□□ -0.3
TUBE1-202ENST00000368662 CYB561D2O14569 222 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 TRAPPC3O43617 180 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 DDHD2O94830 711 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 RAP1GAPP47736 663 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 CDH8P55286 799 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 MTF1Q14872 753 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 SOWAHAQ2M3V2 549 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 DSTYKQ6XUX3 929 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 OTOP2Q7RTS6 562 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 DPF3Q92784 378 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 AGPAT1Q99943 283 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 LBHD1Q9BQE6 289 aaPredicted RBP13.14□□□□□ -0.31
TUBE1-202ENST00000368662 PAAF1Q9BRP4 392 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 NT5C1AQ9BXI3 368 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 SDCBP2Q9H190 292 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 KCND1Q9NSA2 647 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.14□□□□□ -0.31
TUBE1-202ENST00000368662 ADAMTS1Q9UHI8 967 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 NOCTQ9UK39 431 aaKnown RBP13.14□□□□□ -0.31
TUBE1-202ENST00000368662 DSEQ9UL01 958 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 KIAA1257Q9ULG3 409 aa13.14□□□□□ -0.31
TUBE1-202ENST00000368662 ALDH2P05091 517 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 ODC1P11926 461 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 OR1G1P47890 313 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 CDR2Q01850 454 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 C10orf76Q5T2E6 689 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 TOGARAM2Q6ZUX3 1019 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 ZNF365Q70YC5 407 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 C16orf59Q7L2K0 433 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 GPIHBP1Q8IV16 184 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 C3orf58Q8NDZ4 430 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 TMEM176AQ96HP8 235 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 SENP8Q96LD8 212 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 SYT11Q9BT88 431 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 L1RE1Q9UN81 338 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 ADGRG1Q9Y653 693 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 ZBBXA8MT70 800 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 M0QZQ0 153 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 WARSP23381 471 aaKnown RBP13.13□□□□□ -0.31
TUBE1-202ENST00000368662 LHX1P48742 406 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 NDST1P52848 882 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 DEFB103AP81534 67 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 NOP9Q86U38 636 aaKnown RBP13.13□□□□□ -0.31
TUBE1-202ENST00000368662 ADGRF2Q8IZF7 708 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 ZNF689Q96CS4 500 aaPredicted RBP13.13□□□□□ -0.31
TUBE1-202ENST00000368662 COLEC11Q9BWP8 271 aa13.13□□□□□ -0.31
TUBE1-202ENST00000368662 MTIF3Q9H2K0 278 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms