RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 KRT12Q99456 494 aa11.62□□□□□ -0.55
H3F3A-202ENST00000366814 FZD8Q9H461 694 aa11.62□□□□□ -0.55
H3F3A-202ENST00000366814 TTC7AQ9ULT0 858 aaPredicted RBP11.62□□□□□ -0.55
H3F3A-202ENST00000366814 KRIT1O00522 736 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 VNN1O95497 513 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 CYP1A2P05177 515 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 NSFP46459 744 aaKnown RBP11.61□□□□□ -0.55
H3F3A-202ENST00000366814 CDK7P50613 346 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 EPHB4P54760 987 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 RNASE9P60153 205 aaKnown RBP11.61□□□□□ -0.55
H3F3A-202ENST00000366814 YWHAEP62258 255 aaKnown RBP11.61□□□□□ -0.55
H3F3A-202ENST00000366814 FAAP100Q0VG06 881 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 FAM187BQ17R55 369 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 SGSM1Q2NKQ1 1148 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 BADQ92934 168 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 NUP85Q9BW27 656 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 RNPEPQ9H4A4 650 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 CPSF3Q9UKF6 684 aaKnown RBP11.61□□□□□ -0.55
H3F3A-202ENST00000366814 AKT3Q9Y243 479 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 TNFSF13BQ9Y275 285 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 PTPRJQ12913 1337 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 H3BRB1 525 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 HEXIM1O94992 359 aaKnown RBP11.61□□□□□ -0.55
H3F3A-202ENST00000366814 PROZP22891 400 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 GNA15P30679 374 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 TNFSF9P41273 254 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 MBTD1Q05BQ5 628 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 DGKDQ16760 1214 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 PTPROQ16827 1216 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 SEZ6Q53EL9 994 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 SEL1L2Q5TEA6 688 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 LIN9Q5TKA1 542 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 EMBQ6PCB8 327 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 TDHQ8IZJ6 230 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 OR5B17Q8NGF7 314 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 CCDC26Q8TAB7 109 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 DDX1Q92499 740 aaKnown RBP11.61□□□□□ -0.55
H3F3A-202ENST00000366814 SCLT1Q96NL6 688 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 PLVAPQ9BX97 442 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 WNT8AQ9H1J5 351 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 TUT1Q9H6E5 874 aaKnown RBP11.61□□□□□ -0.55
H3F3A-202ENST00000366814 RPF1Q9H9Y2 349 aaKnown RBP11.61□□□□□ -0.55
H3F3A-202ENST00000366814 DMGDHQ9UI17 866 aaKnown RBP11.61□□□□□ -0.55
H3F3A-202ENST00000366814 TMEM59LQ9UK28 342 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 COG5Q9UP83 839 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 ALG6Q9Y672 507 aa11.61□□□□□ -0.55
H3F3A-202ENST00000366814 TMEM110-MUSTN1A8MSY1 372 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 KIAA0355O15063 1070 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 SPOPO43791 374 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 FAM189A1O60320 539 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 KPNA6O60684 536 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 ZMYND10O75800 440 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 ASS1P00966 412 aaKnown RBP11.6□□□□□ -0.55
H3F3A-202ENST00000366814 ZNF286BP0CG31 522 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 WNT7BP56706 349 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 FAM193AP78312 1265 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 TFAMQ00059 246 aaKnown RBP11.6□□□□□ -0.55
H3F3A-202ENST00000366814 SLC7A5Q01650 507 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 POU5F1Q01860 360 aaKnown RBP11.6□□□□□ -0.55
H3F3A-202ENST00000366814 PPFIA1Q13136 1202 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 PAK2Q13177 524 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 MESDQ14696 234 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 SPOPLQ6IQ16 392 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 TMEM270Q6UE05 265 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 MAATS1Q7Z4T9 603 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 APBB1IPQ7Z5R6 666 aaPredicted RBP11.6□□□□□ -0.55
H3F3A-202ENST00000366814 KLHL7Q8IXQ5 586 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 THNSL1Q8IYQ7 743 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 RBBP8NLQ8NC74 664 aaPredicted RBP11.6□□□□□ -0.55
H3F3A-202ENST00000366814 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.6□□□□□ -0.55
H3F3A-202ENST00000366814 MTG1Q9BT17 334 aaPredicted RBP11.6□□□□□ -0.55
H3F3A-202ENST00000366814 SEZ6LQ9BYH1 1024 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 SLITRK6Q9H5Y7 841 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 ACP6Q9NPH0 428 aa11.6□□□□□ -0.55
H3F3A-202ENST00000366814 AVENQ9NQS1 362 aaPredicted RBP11.6□□□□□ -0.55
H3F3A-202ENST00000366814 CNOT8Q9UFF9 292 aaKnown RBP11.6□□□□□ -0.55
H3F3A-202ENST00000366814 EVPLQ92817 2033 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 CCDC66A2RUB6 948 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 A6NJR5 290 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 ABLIM1O14639 778 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 DDX3YO15523 660 aaKnown RBP11.59□□□□□ -0.55
H3F3A-202ENST00000366814 B4GALT4O60513 344 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 MCF2P10911 925 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 OAS2P29728 719 aaKnown RBP11.59□□□□□ -0.55
H3F3A-202ENST00000366814 PURAQ00577 322 aaKnown RBP11.59□□□□□ -0.55
H3F3A-202ENST00000366814 CDC42EP1Q00587 391 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 AENQ8WTP8 325 aaKnown RBP11.59□□□□□ -0.55
H3F3A-202ENST00000366814 VCPIP1Q96JH7 1222 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 RNPC3Q96LT9 517 aaKnown RBP11.59□□□□□ -0.55
H3F3A-202ENST00000366814 MTMR12Q9C0I1 747 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 NIF3L1Q9GZT8 377 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 PTPRHQ9HD43 1115 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 MED4Q9NPJ6 270 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 CNTN6Q9UQ52 1028 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 NUB1Q9Y5A7 615 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 LTBP2Q14767 1821 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 GRIN2DO15399 1336 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 RRN3P2A6NIE6 340 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 THAP12O43422 761 aa11.59□□□□□ -0.55
H3F3A-202ENST00000366814 ERLIN2O94905 339 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms