RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 WDR46O15213 610 aaKnown RBP9.05□□□□□ -0.96
YBX3-204ENST00000366290 SLC3A2P08195 630 aaKnown RBP9.05□□□□□ -0.96
YBX3-204ENST00000366290 CAPN2P17655 700 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 VIPR1P32241 457 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 ZNF200P98182 395 aaPredicted RBP9.05□□□□□ -0.96
YBX3-204ENST00000366290 EXOSC10Q01780 885 aaKnown RBP9.05□□□□□ -0.96
YBX3-204ENST00000366290 PTH1RQ03431 593 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 PPARAQ07869 468 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 COG2Q14746 738 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 ZNF605Q86T29 641 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 MB21D1Q8N884 522 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 USP6NLQ92738 828 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 LSG1Q9H089 658 aaKnown RBP9.05□□□□□ -0.96
YBX3-204ENST00000366290 IRF2BPLQ9H1B7 796 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 PRO3102Q9H379 93 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 MTMR4Q9NYA4 1195 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 DTLQ9NZJ0 730 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.05□□□□□ -0.96
YBX3-204ENST00000366290 COL11A1P12107 1806 aaPredicted RBP9.05□□□□□ -0.96
YBX3-204ENST00000366290 ZNF236Q9UL36 1845 aa9.05□□□□□ -0.96
YBX3-204ENST00000366290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.04□□□□□ -0.96
YBX3-204ENST00000366290 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.04□□□□□ -0.96
YBX3-204ENST00000366290 ORC4O43929 436 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 PRKD3O94806 890 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 FGAP02671 866 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 CYP17A1P05093 508 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 FAHP16930 419 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 PTX3P26022 381 aaPredicted RBP9.04□□□□□ -0.96
YBX3-204ENST00000366290 SDHAP31040 664 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 NOVP48745 357 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 CCNA1P78396 465 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 SMAD3P84022 425 aaKnown RBP9.04□□□□□ -0.96
YBX3-204ENST00000366290 MTMR1Q13613 665 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 SMAD2Q15796 467 aaKnown RBP9.04□□□□□ -0.96
YBX3-204ENST00000366290 CATSPEREQ5SY80 951 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 ZNF444Q8N0Y2 327 aaPredicted RBP9.04□□□□□ -0.96
YBX3-204ENST00000366290 CNTD1Q8N815 330 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 RUFY2Q8WXA3 655 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 SOCS4Q8WXH5 440 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 CEP89Q96ST8 783 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 TRIM8Q9BZR9 551 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 PORCNQ9H237 461 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 BTBD7Q9P203 1132 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 COL6A3P12111 3177 aa9.04□□□□□ -0.96
YBX3-204ENST00000366290 PEX10O60683 326 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 PRDM1O75626 825 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 TTLL1O95922 423 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 GJB1P08034 283 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 PCP11498 1178 aaKnown RBP9.03□□□□□ -0.96
YBX3-204ENST00000366290 NT5C2P49902 561 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 SESN3P58005 492 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 PHC1P78364 1004 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 ITKQ08881 620 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 TERF2Q15554 542 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 BROXQ5VW32 411 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 ESRP1Q6NXG1 681 aaKnown RBP9.03□□□□□ -0.96
YBX3-204ENST00000366290 ETV3LQ6ZN32 361 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 GPR142Q7Z601 462 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 CLRN3Q8NCR9 226 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 GMCL1P1Q8NEA9 526 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 SHCBP1Q8NEM2 672 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 MTMR8Q96EF0 704 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 CEP95Q96GE4 821 aa9.03□□□□□ -0.96
YBX3-204ENST00000366290 TOE1Q96GM8 510 aaKnown RBP9.03□□□□□ -0.96
YBX3-204ENST00000366290 ZNFX1Q9P2E3 1918 aaKnown RBP9.03□□□□□ -0.96
YBX3-204ENST00000366290 SLC15A5A6NIM6 579 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 FLOT1O75955 427 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 LRG1P02750 347 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 HMGCRP04035 888 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 MMEP08473 750 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 HOXC6P09630 235 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 TSPY3P0CV98 308 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 TSPY8P0CW00 308 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 CCL5P13501 91 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 LSP1P33241 339 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 STAT5AP42229 794 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 FNTBP49356 437 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 UBXN2AP68543 259 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 SRSF3P84103 164 aaKnown RBP9.02□□□□□ -0.97
YBX3-204ENST00000366290 GRB14Q14449 540 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 MAP3K21Q5TCX8 1036 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 PLEKHH3Q7Z736 793 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 ABRAQ8N0Z2 381 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 SPICE1Q8N0Z3 855 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 MAP4K1Q92918 833 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 PAGR1Q9BTK6 254 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 ASPSCR1Q9BZE9 553 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 SPATC1LQ9H0A9 340 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 ZMAT4Q9H898 229 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 VTA1Q9NP79 307 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 IL17RBQ9NRM6 502 aa9.02□□□□□ -0.97
YBX3-204ENST00000366290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.02□□□□□ -0.97
YBX3-204ENST00000366290 A0A0C4DFX4 3053 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 F5H6K3 240 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 VWA5AO00534 786 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 ATP2A1O14983 1001 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 STRNO43815 780 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 NDUFB10O96000 172 aa9.01□□□□□ -0.97
YBX3-204ENST00000366290 S100BP04271 92 aaPredicted RBP9.01□□□□□ -0.97
YBX3-204ENST00000366290 ASGR2P07307 311 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms