RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 MAEAQ7L5Y9 396 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 LCORLQ8N3X6 602 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 TSR2Q969E8 191 aaKnown RBP3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 KLHL32Q96NJ5 620 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 NEU1Q99519 415 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 ZSWIM1Q9BR11 485 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 C1orf43Q9BWL3 253 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 ZNF768Q9H5H4 540 aaKnown RBP3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 MMRN2Q9H8L6 949 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 ARMT1Q9H993 441 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 RSAD1Q9HA92 442 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 CYP4F11Q9HBI6 524 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 SLC2A4RGQ9NR83 387 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 OBP2AQ9NY56 170 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 TESQ9UGI8 421 aaKnown RBP3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 PLEKHM1Q9Y4G2 1056 aa3.36□□□□□ -1.87
RNU6-428P-201ENST00000362942 TRGV11A0A075B6L2 103 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 PRAMEF33A0A0G2JMD5 474 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 A0A1W2PS29 197 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 CFAP69A5D8W1 941 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 PRPF3O43395 683 aaKnown RBP3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 PRAMEF10O60809 474 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 RHOBTB3O94955 611 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 MATN4O95460 622 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 ZBED1O96006 694 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 FCER1AP12319 257 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 ANXA11P50995 505 aaKnown RBP3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 ZNF135P52742 658 aaPredicted RBP3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 FPGSQ05932 587 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 SLFN5Q08AF3 891 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 HLXQ14774 488 aaPredicted RBP3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 FAM160B1Q5W0V3 765 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 B3GNTL1Q67FW5 361 aaPredicted RBP3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 SP5Q6BEB4 398 aaPredicted RBP3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 NPNTQ6UXI9 565 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 ZNF783Q6ZMS7 281 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 CCDC149Q6ZUS6 474 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 RHOUQ7L0Q8 258 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 OVCH2Q7RTZ1 564 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 MRGPREQ86SM8 312 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 C14orf80Q86SX3 495 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 USP37Q86T82 979 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 GGNQ86UU5 652 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 PPP1R3BQ86XI6 285 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 CFAP52Q8N1V2 620 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 PDPRQ8NCN5 879 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 SUPT20HQ8NEM7 779 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 TMIEQ8NEW7 156 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 OR6B3Q8NGW1 331 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 PPP1R35Q8TAP8 253 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 KBTBD7Q8WVZ9 684 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 SLC9A6Q92581 669 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 TRIB1Q96RU8 372 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 B3GNT5Q9BYG0 378 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 LRRC27Q9C0I9 530 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 TINAGL1Q9GZM7 467 aaPredicted RBP3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 ZSCAN32Q9NX65 697 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 GPRC5BQ9NZH0 403 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 USP25Q9UHP3 1055 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 CPA4Q9UI42 421 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 TPCN1Q9ULQ1 816 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 MED16Q9Y2X0 877 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 HS3ST3A1Q9Y663 406 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 FRMPD2Q68DX3 1309 aaPredicted RBP3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 AATKQ6ZMQ8 1374 aa3.35□□□□□ -1.87
RNU6-428P-201ENST00000362942 PIPSLA2A3N6 862 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 MARCH11A6NNE9 402 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 ISM1B1AKI9 464 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 M0QYG6 137 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 GOLIM4O00461 696 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 FRS3O43559 492 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 TRIAP1O43715 76 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 NARSO43776 548 aaKnown RBP3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 ORC4O43929 436 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 TBC1D4O60343 1298 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 PRSS23O95084 383 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 AHSGP02765 367 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 HRGP04196 525 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 ELANEP08246 267 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 HKR1P10072 659 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 ITGAMP11215 1152 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 CYP2C9P11712 490 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 RPL17P18621 184 aaKnown RBP3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 ITGALP20701 1170 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 FDXRP22570 491 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 NR4A1P22736 598 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 PHKA1P46020 1223 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 VAV2P52735 878 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 FAM189BP81408 668 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 RAB32Q13637 225 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 CNN3Q15417 329 aaKnown RBP3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 CYP2A13Q16696 494 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 LMBRD2Q68DH5 695 aaPredicted RBP3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 SFRP4Q6FHJ7 346 aaPredicted RBP3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 TAPT1Q6NXT6 567 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 LAYNQ6UX15 382 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 MICALCLQ6ZW33 695 aa3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 CHST15Q7LFX5 561 aaPredicted RBP3.34□□□□□ -1.87
RNU6-428P-201ENST00000362942 DGKHQ86XP1 1220 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms