RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 OCA2Q04671 838 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 ZRANB3Q5FWF4 1079 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 C4orf22Q6V702 233 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 HERC6Q8IVU3 1022 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 RNF168Q8IYW5 571 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 HPDLQ96IR7 371 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 AGAP3Q96P47 875 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 CDK5RAP1Q96SZ6 601 aaKnown RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 C17orf75Q9HAS0 396 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 RRAGCQ9HB90 399 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 HMX1Q9NP08 348 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 TUBE1Q9UJT0 475 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 FHOD1Q9Y613 1164 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 TRIM49BA6NDI0 452 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 GSNP06396 782 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 PNMA6AP0CW24 399 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 IL10P22301 178 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 MZF1P28698 734 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 TGM3Q08188 693 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 DCAF6Q58WW2 860 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 OXER1Q8TDS5 423 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 SOCS4Q8WXH5 440 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 PAWRQ96IZ0 340 aaKnown RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 NFKBIZQ9BYH8 718 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 NIF3L1Q9GZT8 377 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 GYG2O15488 501 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 GCKP35557 465 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 NFE2Q16621 373 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 SYDE1Q6ZW31 735 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 DEFB132Q7Z7B7 95 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 MARCH10Q8NA82 808 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 RPRD1AQ96P16 312 aaPredicted RBP11.47□□□□□ -0.57
CLIP1-203ENST00000361654 SCUBE2Q9NQ36 999 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 FAM49BQ9NUQ9 324 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 GRID2IPA4D2P6 1211 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 EXTL3O43909 919 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 RAB27AP51159 221 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 IZUMO3Q5VZ72 239 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 CPA4Q9UI42 421 aa11.47□□□□□ -0.57
CLIP1-203ENST00000361654 MEFVO15553 781 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 CLASP2O75122 1294 aaKnown RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 KRT4P19013 534 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 SLC26A2P50443 739 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 ARSEP51690 589 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 BTG3Q14201 252 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 FAM133BQ5BKY9 247 aaKnown RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 BBS7Q8IWZ6 715 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 PHACTR4Q8IZ21 702 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 STAG2Q8N3U4 1231 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 ELMO2Q96JJ3 720 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 MRPL9Q9BYD2 267 aaKnown RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 ZNF556Q9HAH1 456 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 SCOCQ9UIL1 159 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 NCKAP1Q9Y2A7 1128 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 MYO1CO00159 1063 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 KRT8P05787 483 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 HIF1AQ16665 826 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 NAPEPLDQ6IQ20 393 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 DEFB128Q7Z7B8 93 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 ACTR5Q9H9F9 607 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 MBD5Q9P267 1494 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 PDS5AQ29RF7 1337 aaKnown RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 C2orf81A6NN90 581 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 ANXA9O76027 345 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 RHOBTB3O94955 611 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 CHRM3P20309 590 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 SERPINB9P50453 376 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 ATP2C1P98194 919 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 CAMK2GQ13555 558 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 PCSK7Q16549 785 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 C6orf10Q5SRN2 563 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 CES5AQ6NT32 575 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 TRIM65Q6PJ69 517 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 PRUNE1Q86TP1 453 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 ZFYVE19Q96K21 471 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 CYTH2Q99418 400 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 LNPEPQ9UIQ6 1025 aa11.46□□□□□ -0.57
CLIP1-203ENST00000361654 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-203ENST00000361654 FAM47DPA6NHR8 397 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 HNRNPRO43390 633 aaKnown RBP11.46□□□□□ -0.58
CLIP1-203ENST00000361654 CCDC22O60826 627 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 F9P00740 461 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 MTA1Q13330 715 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 USP10Q14694 798 aaKnown RBP11.46□□□□□ -0.58
CLIP1-203ENST00000361654 GOLGA7BQ2TAP0 167 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 TRAPPC11Q7Z392 1133 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 HIPK4Q8NE63 616 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 ATL2Q8NHH9 583 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 SLC13A1Q9BZW2 595 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 CKBP12277 381 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 KLRC2P26717 231 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 GUCY1A2P33402 732 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 GEMIN4P57678 1058 aaKnown RBP11.46□□□□□ -0.58
CLIP1-203ENST00000361654 LINC00523Q86TU6 105 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 SIRT2Q8IXJ6 389 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 B4GALNT2Q8NHY0 566 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 DDI1Q8WTU0 396 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 UBXN6Q9BZV1 441 aa11.46□□□□□ -0.58
CLIP1-203ENST00000361654 BRD8Q9H0E9 1235 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms