RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PXMP2Q9NR77 195 aa17.18■□□□□ 0.34
SCAF1-201ENST00000360565 PDGFRBP09619 1106 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 KPNA2P52292 529 aaKnown RBP17.17■□□□□ 0.34
SCAF1-201ENST00000360565 EFHC2Q5JST6 749 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 C1orf146Q5VVC0 180 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 C11orf63Q6NUN7 778 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 ZNF662Q6ZS27 426 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 BBS5Q8N3I7 341 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 FAM71DQ8N9W8 422 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 PRPF31Q8WWY3 499 aaKnown RBP17.17■□□□□ 0.34
SCAF1-201ENST00000360565 RNF181Q9P0P0 153 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 NRXN3Q9Y4C0 1643 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 OGTO15294 1046 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 SYF2O95926 243 aaKnown RBP17.17■□□□□ 0.34
SCAF1-201ENST00000360565 PDHA1P08559 390 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 ZNF844Q08AG5 666 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 JADE1Q6IE81 842 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 TTC1Q99614 292 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 ACP6Q9NPH0 428 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 LTN1O94822 1766 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 ZC3H11AO75152 810 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCAF1-201ENST00000360565 LMNAP02545 664 aaKnown RBP17.17■□□□□ 0.34
SCAF1-201ENST00000360565 ORC1Q13415 861 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 CHST13Q8NET6 341 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 PARD3BQ8TEW8 1205 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 ZNF384Q8TF68 577 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 TSSK1BQ9BXA7 367 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 ZFATQ9P243 1243 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 PROSCO94903 275 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 SUPT20HL2P0C7V6 817 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 COPS2P61201 443 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 ZNF200P98182 395 aaPredicted RBP17.17■□□□□ 0.34
SCAF1-201ENST00000360565 PPP3CAQ08209 521 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 LVRNQ6Q4G3 990 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 GSDMBQ8TAX9 411 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 CERKQ8TCT0 537 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 VPS39Q96JC1 886 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 SIK2Q9H0K1 926 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 METTL5Q9NRN9 209 aaKnown RBP17.17■□□□□ 0.34
SCAF1-201ENST00000360565 EPS15L1Q9UBC2 864 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 MARCOQ9UEW3 520 aaPredicted RBP17.17■□□□□ 0.34
SCAF1-201ENST00000360565 SLC12A6Q9UHW9 1150 aa17.17■□□□□ 0.34
SCAF1-201ENST00000360565 CPSF3Q9UKF6 684 aaKnown RBP17.17■□□□□ 0.34
SCAF1-201ENST00000360565 SPDYE16A6NNV3 312 aaPredicted RBP17.16■□□□□ 0.34
SCAF1-201ENST00000360565 SH3BP5O60239 455 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 CYP3A4P08684 503 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 ZFXP17010 805 aaPredicted RBP17.16■□□□□ 0.34
SCAF1-201ENST00000360565 SPDYE2Q495Y8 402 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 NBPF12Q5TAG4 269 aaPredicted RBP17.16■□□□□ 0.34
SCAF1-201ENST00000360565 KRT35Q92764 455 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 LRGUKQ96M69 825 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 AGAP3Q96P47 875 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 NT5C1AQ9BXI3 368 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 FAM129AQ9BZQ8 928 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 RSAD1Q9HA92 442 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 LRRC4BQ9NT99 713 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 TAS2R14Q9NYV8 317 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 RGPD8O14715 1765 aaPredicted RBP17.16■□□□□ 0.34
SCAF1-201ENST00000360565 GOLGA8QA0A0J9YX86 632 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 GOLGA8OA6NCC3 632 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 GOLGA8NF8WBI6 632 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 PFDN6O15212 129 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 PSTPIP1O43586 416 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 TMEM62Q0P6H9 643 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 CCNYL1Q8N7R7 359 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 ALKBH8Q96BT7 664 aaKnown RBP17.16■□□□□ 0.34
SCAF1-201ENST00000360565 FGFBP2Q9BYJ0 223 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 MAP3K20Q9NYL2 800 aaKnown RBP17.16■□□□□ 0.34
SCAF1-201ENST00000360565 ASTN1O14525 1302 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 CES2O00748 559 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 NAMPTP43490 491 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 PTK7Q13308 1070 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 PGM5Q15124 567 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 RBBP5Q15291 538 aaKnown RBP17.16■□□□□ 0.34
SCAF1-201ENST00000360565 C4orf50Q6ZRC1 276 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 KCTD10Q9H3F6 313 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 CYP4F11Q9HBI6 524 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 WHRNQ9P202 907 aa17.16■□□□□ 0.34
SCAF1-201ENST00000360565 FAM208AQ9UK61 1670 aaKnown RBP17.16■□□□□ 0.34
SCAF1-201ENST00000360565 CYP3A7-CYP3A51PA0A087WV96 503 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 ZNF263O14978 683 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 ASAP2O43150 1006 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 MAP3K6O95382 1288 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 CYP3A7P24462 503 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 SCN4BQ8IWT1 228 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 PRMT7Q9NVM4 692 aaPredicted RBP17.15■□□□□ 0.34
SCAF1-201ENST00000360565 ATP9BO43861 1147 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 PSMD10O75832 226 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 ITGB3P05106 788 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 RARAP10276 462 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 RPL21P46778 160 aaKnown RBP17.15■□□□□ 0.34
SCAF1-201ENST00000360565 DLG4P78352 724 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 MAP7Q14244 749 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 FASTKD5Q7L8L6 764 aaKnown RBP17.15■□□□□ 0.34
SCAF1-201ENST00000360565 RAB44Q7Z6P3 723 aaPredicted RBP17.15■□□□□ 0.34
SCAF1-201ENST00000360565 NOP9Q86U38 636 aaKnown RBP17.15■□□□□ 0.34
SCAF1-201ENST00000360565 FAM83AQ86UY5 434 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 H3BRJ5 948 aa17.15■□□□□ 0.34
SCAF1-201ENST00000360565 SPATA31C1P0DKV0 1188 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms