RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 NSMCE1Q8WV22 266 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 LENG9Q96B70 501 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 NEUROG2Q9H2A3 272 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 ERVK-5Q9HDB9 667 aa12.93□□□□□ -0.34
COL20A1-201ENST00000358894 RGS7P49802 495 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 CLEC16AQ2KHT3 1053 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 SYDE1Q6ZW31 735 aaPredicted RBP12.92□□□□□ -0.34
COL20A1-201ENST00000358894 APOBEC3FQ8IUX4 373 aaKnown RBP12.92□□□□□ -0.34
COL20A1-201ENST00000358894 MREGQ8N565 214 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 RNF217Q8TC41 542 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 PCDHA2Q9Y5H9 948 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 BTNL10A8MVZ5 291 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 GARTP22102 1010 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 NLRP11P59045 1033 aaKnown RBP12.92□□□□□ -0.34
COL20A1-201ENST00000358894 EIF3EP60228 445 aaKnown RBP12.92□□□□□ -0.34
COL20A1-201ENST00000358894 MAP7Q14244 749 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 LONP2Q86WA8 852 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 MCOLN2Q8IZK6 566 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 ATP11CQ8NB49 1132 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 ROPN1BQ9BZX4 212 aaPredicted RBP12.92□□□□□ -0.34
COL20A1-201ENST00000358894 ROPN1Q9HAT0 212 aaPredicted RBP12.92□□□□□ -0.34
COL20A1-201ENST00000358894 SLC38A10Q9HBR0 1119 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 TJP1Q07157 1748 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 IREB2P48200 963 aaKnown RBP12.92□□□□□ -0.34
COL20A1-201ENST00000358894 DNAJC3Q13217 504 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 TFDP2Q14188 446 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 EXOC8Q8IYI6 725 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 LRRC57Q8N9N7 239 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 RDM1Q8NG50 284 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 VCX3BQ9H321 246 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 VCX3AQ9NNX9 186 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 ASNSD1Q9NWL6 643 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 ARL2BPQ9Y2Y0 163 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 COMMD10Q9Y6G5 202 aa12.92□□□□□ -0.34
COL20A1-201ENST00000358894 IQANK1A0A1B0GTG1 560 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 VWA5AO00534 786 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 RIPK2O43353 540 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 CREB3O43889 395 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 MAP3K6O95382 1288 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 TXNP10599 105 aaKnown RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SPIRE1Q08AE8 756 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 NR1H3Q13133 447 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SEPT6Q14141 434 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SGSM1Q2NKQ1 1148 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SH2D4BQ5SQS7 431 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 LLGL2Q6P1M3 1020 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 CATSPER4Q7RTX7 472 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 ZNF677Q86XU0 584 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 FAM129AQ9BZQ8 928 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 NIF3L1Q9GZT8 377 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 KIAA1683Q9H0B3 1180 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 C2orf40Q9H1Z8 148 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SCOCQ9UIL1 159 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 C19orf81C9J6K1 198 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 KIAA0391O15091 583 aaKnown RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 CSDE1O75534 798 aaKnown RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 PHKA2P46019 1235 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 BCAR1P56945 870 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 FKBP1AP62942 108 aaKnown RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 DRP2Q13474 957 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SDCCAG8Q86SQ7 713 aaPredicted RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 PRPF31Q8WWY3 499 aaKnown RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 PCDHA3Q9Y5H8 950 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 DOT1LQ8TEK3 1739 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 FAM47DPA6NHR8 397 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 RPS6KA5O75582 802 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 TOM1L1O75674 476 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 PROSCO94903 275 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SUPT20HL2P0C7V6 817 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 TCF7P36402 384 aaPredicted RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 ARL1P40616 181 aaPredicted RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 JAG1P78504 1218 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 XRRA1Q6P2D8 792 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 CYB5D1Q6P9G0 228 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 MAP4K3Q8IVH8 894 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 PDCD7Q8N8D1 485 aaKnown RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SLC13A1Q9BZW2 595 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 ELP3Q9H9T3 547 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 DDX56Q9NY93 547 aaKnown RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 AGAP1Q9UPQ3 857 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 TAF1P21675 1872 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 YDJCA8MPS7 323 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 COPEO14579 308 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 STAMBPO95630 424 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 MAPTP10636 758 aaKnown RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SDC4P31431 198 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 ARL4AP40617 200 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 FMO1Q01740 532 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 FAM47CQ5HY64 1035 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 FAM43BQ6ZT52 329 aaPredicted RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 CCDC60Q8IWA6 550 aaPredicted RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 TMEM161BQ8NDZ6 487 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 ZSWIM2Q8NEG5 633 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 SNX25Q9H3E2 840 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 WRAP73Q9P2S5 460 aaPredicted RBP12.91□□□□□ -0.34
COL20A1-201ENST00000358894 CHMP2BQ9UQN3 213 aa12.91□□□□□ -0.34
COL20A1-201ENST00000358894 RBP3P10745 1247 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 OSBPP22059 807 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 MYL6P60660 151 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms