RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MAP3K7O43318 606 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 C21orf2O43822 256 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 WEE2P0C1S8 567 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 GNAT1P11488 350 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 CIITAP33076 1130 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 GCLCP48506 637 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 WDR4P57081 412 aaKnown RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PSMC5P62195 406 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PPP2R5CQ13362 524 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 DGKZQ13574 1117 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 THOC5Q13769 683 aaKnown RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PTK6Q13882 451 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 SLC1A5Q15758 541 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 NBPF20Q3BBV1 942 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 CDR2LQ86X02 465 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 LRRC6Q86X45 466 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 DAW1Q8N136 415 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 ARHGAP24Q8N264 748 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 CCDC33Q8N5R6 958 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 SLC25A41Q8N5S1 370 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 FAM13CQ8NE31 585 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PLEKHO2Q8TD55 490 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 TEKT4Q8WW24 435 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 SEC14L1Q92503 715 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 RBM41Q96IZ5 413 aaKnown RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 FAM81BQ96LP2 452 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 POLR3FQ9H1D9 316 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 CYP4F11Q9HBI6 524 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 RBAKQ9NYW8 714 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PSMC3IPQ9P2W1 217 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 HEY1Q9Y5J3 304 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 E2F8A0AVK6 867 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 FSCN2O14926 492 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 SLC26A4O43511 780 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 CST8O60676 142 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 PROSCO94903 275 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 CYP1A2P05177 515 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 SRGAP2CP0DJJ0 459 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 ITGB5P18084 799 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 BRD2P25440 801 aaKnown RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 CHRNA5P30532 468 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 RFC5P40937 340 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 SLC1A1P43005 524 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 ALDH18A1P54886 795 aaKnown RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 RPL7AP62424 266 aaKnown RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 JAG1P78504 1218 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 UGCGQ16739 394 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 THNSL1Q8IYQ7 743 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 GLIS1Q8NBF1 620 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 TCP10LQ8TDR4 215 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 SHC3Q92529 594 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 TTC25Q96NG3 672 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 CRAMP1Q96RY5 1269 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 HERPUD2Q9BSE4 406 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 TMEM39BQ9GZU3 492 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 RNPEPL1Q9HAU8 725 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 AGO2Q9UKV8 859 aaKnown RBP6.93□□□□□ -1.3
CSDE1-203ENST00000358528 SCINQ9Y6U3 715 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 IVNS1ABPQ9Y6Y0 642 aa6.93□□□□□ -1.3
CSDE1-203ENST00000358528 UBE4BO95155 1302 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 B2RBV5 119 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 F8VP50 259 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 COPEO14579 308 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 P4HA2O15460 535 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 NPR1P16066 1061 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 KCNA3P22001 575 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 CALB2P22676 271 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SERPINB3P29508 390 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 GTF2H1P32780 548 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SERPINB6P35237 376 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 PTDSS1P48651 473 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 NR1H3Q13133 447 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 TKFCQ3LXA3 575 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 MFSD5Q6N075 450 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 C1orf228Q6PIY5 440 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SLC30A9Q6PML9 568 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SYDE1Q6ZW31 735 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SH3BP5LQ7L8J4 393 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 ZC3H3Q8IXZ2 948 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 FAM71DQ8N9W8 422 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 ATP11CQ8NB49 1132 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 STK32AQ8WU08 396 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 LRRN4Q8WUT4 740 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 ZNF75CPQ92670 426 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 BORCS6Q96GS4 357 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 GMCL1Q96IK5 515 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 ZBTB45Q96K62 511 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SENP7Q9BQF6 1050 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 THTPAQ9BU02 230 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 TXLNGYQ9BZA5 131 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 MANSC1Q9H8J5 431 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 FBXO6Q9NRD1 293 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SLC9A2Q9UBY0 812 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 NOCTQ9UK39 431 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SMG5Q9UPR3 1016 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 CHKBQ9Y259 395 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 PPP1R12AO14974 1030 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 RNF8O76064 485 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 CFHP08603 1231 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms