RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 DOLKQ9UPQ8 538 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 AKAP11Q9UKA4 1901 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 KLRG2A4D1S0 409 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-202ENST00000357710 KRT36O76013 467 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 ZWINTO95229 277 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 MAP3K6O95382 1288 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 IST1P53990 364 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 CDR2Q01850 454 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 C19orf57Q0VDD7 668 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 C16orf72Q14CZ0 275 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 MTFR1Q15390 333 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 ZCCHC8Q6NZY4 707 aaKnown RBP11.86□□□□□ -0.51
PSEN1-202ENST00000357710 USP43Q70EL4 1123 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 RNF169Q8NCN4 708 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 ZFPM2Q8WW38 1151 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 TTC9Q92623 222 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 SCPEP1Q9HB40 452 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 C8orf4Q9NR00 106 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 RRN3Q9NYV6 651 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 CAPN11Q9UMQ6 739 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 NDUFB9Q9Y6M9 179 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 LRRC37AA6NMS7 1700 aa11.86□□□□□ -0.51
PSEN1-202ENST00000357710 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
PSEN1-202ENST00000357710 ESYT3A0FGR9 886 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 RGS16O15492 202 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-202ENST00000357710 KPNA6O60684 536 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 RNASEH2AO75792 299 aaKnown RBP11.85□□□□□ -0.51
PSEN1-202ENST00000357710 TOMM70O94826 608 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 PRKACAP17612 351 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 VCLP18206 1134 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 MARCKSP29966 332 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-202ENST00000357710 SLC5A2P31639 672 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 ADCY8P40145 1251 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 PHKA1P46020 1223 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 ARHGAP4P98171 946 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 PPP2R2BQ00005 443 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 FKBP4Q02790 459 aaKnown RBP eCLIP11.85□□□□□ -0.51
PSEN1-202ENST00000357710 CDC16Q13042 620 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 SPA17Q15506 151 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 CERKLQ49MI3 558 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-202ENST00000357710 ECHDC2Q86YB7 292 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 TMEM151BQ8IW70 566 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 LPIN3Q9BQK8 851 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 HERC2P3Q9BVR0 1158 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 PDGFDQ9GZP0 370 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-202ENST00000357710 EPB41L4AQ9HCS5 686 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-202ENST00000357710 GGT7Q9UJ14 662 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 TCP11X1B4DZS4 312 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 MYCP01106 439 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-202ENST00000357710 LAPTM5Q13571 262 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 GNA13Q14344 377 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 EDRF1Q3B7T1 1238 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 NFRKBQ6P4R8 1299 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 POTEHQ6S545 545 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 FRA10AC1Q70Z53 315 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 INPP4AQ96PE3 977 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-202ENST00000357710 BTBD9Q96Q07 612 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 LRRC37BQ96QE4 947 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 CRAMP1Q96RY5 1269 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 PHF20Q9BVI0 1012 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 VPS33BQ9H267 617 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 MARCH7Q9H992 704 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 USP40Q9NVE5 1235 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 NDE1Q9NXR1 346 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 SCINQ9Y6U3 715 aa11.85□□□□□ -0.51
PSEN1-202ENST00000357710 XPO1O14980 1071 aaKnown RBP11.84□□□□□ -0.51
PSEN1-202ENST00000357710 DDHD2O94830 711 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 MCAMP43121 646 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 TAGLNQ01995 201 aaKnown RBP11.84□□□□□ -0.51
PSEN1-202ENST00000357710 TTF1Q15361 905 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-202ENST00000357710 HSP90AA4PQ58FG1 418 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 ACSBG2Q5FVE4 666 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 IDO2Q6ZQW0 420 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 ANKLE1Q8NAG6 615 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 CKAP2Q8WWK9 683 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 LACRTQ9GZZ8 138 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 GPAMQ9HCL2 828 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 CNOT7Q9UIV1 285 aaKnown RBP11.84□□□□□ -0.51
PSEN1-202ENST00000357710 CCDC22O60826 627 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 GPC4O75487 556 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 ALX3O95076 343 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 CDK9P50750 372 aaKnown RBP11.84□□□□□ -0.51
PSEN1-202ENST00000357710 GNG2P59768 71 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 KRT81Q14533 505 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 PSMD6Q15008 389 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 USP41Q3LFD5 358 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 ANKRD20A4Q4UJ75 823 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 CAVIN4Q5BKX8 364 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 TNFAIP8L3Q5GJ75 292 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 PPP6R3Q5H9R7 873 aaPredicted RBP11.84□□□□□ -0.51
PSEN1-202ENST00000357710 CCNJQ5T5M9 372 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 NEK5Q6P3R8 708 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 PDSS2Q86YH6 399 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 TRMT44Q8IYL2 757 aaKnown RBP11.84□□□□□ -0.51
PSEN1-202ENST00000357710 ZFP28Q8NHY6 868 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 RIN3Q8TB24 985 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 MTMR9Q96QG7 549 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 KRT12Q99456 494 aa11.84□□□□□ -0.51
PSEN1-202ENST00000357710 KIAA1683Q9H0B3 1180 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms