RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 GRIN1Q05586 938 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 DUSP4Q13115 394 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 MYBPC2Q14324 1141 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 POSTNQ15063 836 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 ZC2HC1CQ53FD0 456 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-204ENST00000356316 DYMQ7RTS9 669 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 YAF2Q8IY57 180 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 THEM5Q8N1Q8 247 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 FAM200AQ8TCP9 573 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 EPSTI1Q96J88 318 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 SENP8Q96LD8 212 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 ASB16Q96NS5 453 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 MRPL44Q9H9J2 332 aaKnown RBP11.55□□□□□ -0.56
CAPN3-204ENST00000356316 LTB4R2Q9NPC1 389 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 HEBP1Q9NRV9 189 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 CEP72Q9P209 647 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 CPSF3Q9UKF6 684 aaKnown RBP11.55□□□□□ -0.56
CAPN3-204ENST00000356316 FBXO4Q9UKT5 387 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 DSEQ9UL01 958 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 EXOC7Q9UPT5 735 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 SLC27A5Q9Y2P5 690 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 ASB3Q9Y575 518 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 CLIC4Q9Y696 253 aa11.55□□□□□ -0.56
CAPN3-204ENST00000356316 ANKRD63C9JTQ0 380 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 ZNF263O14978 683 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 FAM189A1O60320 539 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 FGF19O95750 216 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 OR4Q2P0C623 313 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 C7P10643 843 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 GLULP15104 373 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 GAP43P17677 238 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 TYMPP19971 482 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 GDI1P31150 447 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 CCR2P41597 374 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 TUFMP49411 452 aaKnown RBP11.54□□□□□ -0.56
CAPN3-204ENST00000356316 AARSP49588 968 aaKnown RBP eCLIP11.54□□□□□ -0.56
CAPN3-204ENST00000356316 GUCY2FP51841 1108 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 CEBPZQ03701 1054 aaKnown RBP11.54□□□□□ -0.56
CAPN3-204ENST00000356316 CUL4AQ13619 759 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 GRM2Q14416 872 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 TAF12Q16514 161 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 ZNF528Q3MIS6 628 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 C9orf57Q5W0N0 161 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 CENPPQ6IPU0 288 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 ZNF720Q7Z2F6 126 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 ITIH5Q86UX2 942 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 MAP4K3Q8IVH8 894 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 ZSCAN18Q8TBC5 510 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-204ENST00000356316 DEPDC1BQ8WUY9 529 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 ATRIPQ8WXE1 791 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 POMGNT1Q8WZA1 660 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 HVCN1Q96D96 273 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 ZSWIM3Q96MP5 696 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 ST6GALNAC4Q9H4F1 302 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 DPP3Q9NY33 737 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 MTF2Q9Y483 593 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-204ENST00000356316 YIPF1Q9Y548 306 aa11.54□□□□□ -0.56
CAPN3-204ENST00000356316 SRPRBQ9Y5M8 271 aaKnown RBP11.54□□□□□ -0.56
CAPN3-204ENST00000356316 CACNA1HO95180 2353 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 A0A1W2PRU2 124 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 PIRO00625 290 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 CYB561D2O14569 222 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 KINO60870 393 aaKnown RBP11.53□□□□□ -0.56
CAPN3-204ENST00000356316 IL18RAPO95256 599 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 NFICP08651 508 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 GJA1P17302 382 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 SYT1P21579 422 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 VIPR2P41587 438 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 EPHA5P54756 1037 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 POU5F1Q01860 360 aaKnown RBP11.53□□□□□ -0.56
CAPN3-204ENST00000356316 CSTF1Q05048 431 aaKnown RBP11.53□□□□□ -0.56
CAPN3-204ENST00000356316 PPP2R5DQ14738 602 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 VEPH1Q14D04 833 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 TEAD2Q15562 447 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 ARHGAP15Q53QZ3 475 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 CCDC73Q6ZRK6 1079 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 DNAJB7Q7Z6W7 309 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-204ENST00000356316 MFSD6LQ8IWD5 586 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 SYCP3Q8IZU3 236 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 CSGALNACT1Q8TDX6 532 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 LRRC15Q8TF66 581 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 ACCSQ96QU6 501 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 ATXN3LQ9H3M9 355 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 ZNF334Q9HCZ1 680 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-204ENST00000356316 TRPV5Q9NQA5 729 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 HSFX1Q9UBD0 423 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 SEL1LQ9UBV2 794 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 R3HCC1Q9Y3T6 440 aaKnown RBP11.53□□□□□ -0.56
CAPN3-204ENST00000356316 C2CD2Q9Y426 696 aa11.53□□□□□ -0.56
CAPN3-204ENST00000356316 DPYSL4O14531 572 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 GCNT3O95395 438 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 LDHAP00338 332 aaKnown RBP11.52□□□□□ -0.57
CAPN3-204ENST00000356316 IDEP14735 1019 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 FCARP24071 287 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 TARSP26639 723 aaKnown RBP11.52□□□□□ -0.57
CAPN3-204ENST00000356316 RPS9P46781 194 aaKnown RBP11.52□□□□□ -0.57
CAPN3-204ENST00000356316 TAF6P49848 677 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 FOXK2Q01167 660 aa11.52□□□□□ -0.57
CAPN3-204ENST00000356316 PTPAQ15257 358 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms