RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.69■□□□□ 0.26
TRIM13-201ENST00000356017 H7C4K7 107 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 RFXAPO00287 272 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 CXCL14O95715 111 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 CYP11A1P05108 521 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 ATP1A3P13637 1013 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
TRIM13-201ENST00000356017 ERVFC1P60507 584 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 NOP14P78316 857 aaKnown RBP16.68■□□□□ 0.26
TRIM13-201ENST00000356017 YWHAHQ04917 246 aaPredicted RBP16.68■□□□□ 0.26
TRIM13-201ENST00000356017 FKBP15Q5T1M5 1219 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 KIAA0319Q5VV43 1072 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 GBP6Q6ZN66 633 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 DEFB123Q8N688 67 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 MRPL43Q8N983 215 aaKnown RBP16.68■□□□□ 0.26
TRIM13-201ENST00000356017 PIK3R5Q8WYR1 880 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 PPP2R3CQ969Q6 453 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 MMS19Q96T76 1030 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 VPS16Q9H269 839 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 TAB2Q9NYJ8 693 aa16.68■□□□□ 0.26
TRIM13-201ENST00000356017 NXF1Q9UBU9 619 aaKnown RBP16.68■□□□□ 0.26
TRIM13-201ENST00000356017 FSCN2O14926 492 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 OAZ2O95190 189 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 POU3F3P20264 500 aaPredicted RBP16.67■□□□□ 0.26
TRIM13-201ENST00000356017 COPB1P53618 953 aaKnown RBP16.67■□□□□ 0.26
TRIM13-201ENST00000356017 RTP2Q5QGT7 225 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 EHBP1Q8NDI1 1231 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 RIN2Q8WYP3 895 aaPredicted RBP16.67■□□□□ 0.26
TRIM13-201ENST00000356017 SEMA4DQ92854 862 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 PI4K2AQ9BTU6 479 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 CHD9Q3L8U1 2897 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 C2CD2LO14523 706 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 CA8P35219 290 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 PTPN14Q15678 1187 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 EXOC3L4Q17RC7 722 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 SOWAHAQ2M3V2 549 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 FILIP1LQ4L180 1135 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 VARS2Q5ST30 1063 aaKnown RBP16.67■□□□□ 0.26
TRIM13-201ENST00000356017 OVOS1Q6IE37 1185 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 LIMS2Q7Z4I7 341 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 THEM5Q8N1Q8 247 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 RNF214Q8ND24 703 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 LNX1Q8TBB1 728 aaPredicted RBP16.67■□□□□ 0.26
TRIM13-201ENST00000356017 B3GALT6Q96L58 329 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 EMILIN2Q9BXX0 1053 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 NIF3L1Q9GZT8 377 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 GCNT4Q9P109 453 aa16.67■□□□□ 0.26
TRIM13-201ENST00000356017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.66■□□□□ 0.26
TRIM13-201ENST00000356017 C2orf71A6NGG8 1288 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 LILRB3O75022 631 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 TACC1O75410 805 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 SERPINC1P01008 464 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 IRS1P35568 1242 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 LHX1P48742 406 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 MRPL58Q14197 206 aaKnown RBP16.66■□□□□ 0.26
TRIM13-201ENST00000356017 PLPP4Q5VZY2 271 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 WSCD1Q658N2 575 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 ZNF280DQ6N043 979 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 Q7L0L9 218 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 ADGRF2Q8IZF7 708 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 PDCL2Q8N4E4 241 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 LMO3Q8TAP4 145 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 NT5C1BQ96P26 610 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 FAM124BQ9H5Z6 455 aaPredicted RBP16.66■□□□□ 0.26
TRIM13-201ENST00000356017 FNIP2Q9P278 1114 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 L1RE1Q9UN81 338 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 TIMM13Q9Y5L4 95 aaPredicted RBP16.66■□□□□ 0.26
TRIM13-201ENST00000356017 BACE2Q9Y5Z0 518 aa16.66■□□□□ 0.26
TRIM13-201ENST00000356017 LGALS16A8MUM7 142 aa16.65■□□□□ 0.26
TRIM13-201ENST00000356017 TBXAS1P24557 533 aaPredicted RBP16.65■□□□□ 0.26
TRIM13-201ENST00000356017 PSMD5Q16401 504 aa16.65■□□□□ 0.26
TRIM13-201ENST00000356017 SPOPLQ6IQ16 392 aa16.65■□□□□ 0.26
TRIM13-201ENST00000356017 APTXQ7Z2E3 356 aaKnown RBP16.65■□□□□ 0.26
TRIM13-201ENST00000356017 TTC39CQ8N584 583 aa16.65■□□□□ 0.26
TRIM13-201ENST00000356017 FAM81BQ96LP2 452 aa16.65■□□□□ 0.26
TRIM13-201ENST00000356017 CDX2Q99626 313 aaPredicted RBP16.65■□□□□ 0.26
TRIM13-201ENST00000356017 INTS2Q9H0H0 1204 aaKnown RBP16.65■□□□□ 0.26
TRIM13-201ENST00000356017 CYP3A43Q9HB55 503 aa16.65■□□□□ 0.26
TRIM13-201ENST00000356017 RXFP1Q9HBX9 757 aa16.65■□□□□ 0.26
TRIM13-201ENST00000356017 APOBEC3GQ9HC16 384 aaKnown RBP16.65■□□□□ 0.26
TRIM13-201ENST00000356017 MTRRQ9UBK8 725 aa16.65■□□□□ 0.26
TRIM13-201ENST00000356017 CHD7Q9P2D1 2997 aa16.65■□□□□ 0.26
TRIM13-201ENST00000356017 SCN1AP35498 2009 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 FSD2A1L4K1 749 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 LRRN2O75325 713 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 CSPG5O95196 566 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 IGFBP4P22692 258 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 CTXN3Q4LDR2 81 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 TRIM65Q6PJ69 517 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 PRSS55Q6UWB4 352 aaPredicted RBP16.64■□□□□ 0.25
TRIM13-201ENST00000356017 AUTS2Q8WXX7 1259 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 CRACR2AQ9BSW2 395 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 BCO2Q9BYV7 579 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 SNX25Q9H3E2 840 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 NSUN3Q9H649 340 aaKnown RBP16.64■□□□□ 0.25
TRIM13-201ENST00000356017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.64■□□□□ 0.251e-6■■■■■ 67.3
TRIM13-201ENST00000356017 MTMR10Q9NXD2 777 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 MTCH2Q9Y6C9 303 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 PLXNA4Q9HCM2 1894 aa16.64■□□□□ 0.25
TRIM13-201ENST00000356017 OR6C75A6NL08 312 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms