RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TGFB1I1O43294 461 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 HCRTO43612 131 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 LRG1P02750 347 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 HSP90AA1P07900 732 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 SRFP11831 508 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 TYMPP19971 482 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 GPC5P78333 572 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 ASIC1P78348 528 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 DUSP4Q13115 394 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 CUL4BQ13620 913 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 CCDC142Q17RM4 750 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 ASTLQ6HA08 431 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 OVOS1Q6IE37 1185 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 LRRTM3Q86VH5 581 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 CCDC65Q8IXS2 484 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 C1orf127Q8N9H9 656 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 ATAD1Q8NBU5 361 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 ZSWIM3Q96MP5 696 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 C7orf25Q9BPX7 421 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 KCNH6Q9H252 994 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 PDE11AQ9HCR9 933 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 SIX4Q9UIU6 781 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 RCOR1Q9UKL0 485 aa18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 MRPS23Q9Y3D9 190 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-201ENST00000355572 H0Y858 1186 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 XPOTO43592 962 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 LRRN2O75325 713 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 CYP11A1P05108 521 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 PTPN2P17706 415 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 GARTP22102 1010 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 ELF1P32519 619 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 ABCD1P33897 745 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 WSCD1Q658N2 575 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 CNNM4Q6P4Q7 775 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 TMC8Q8IU68 726 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 CBWD2Q8IUF1 395 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 SYCP3Q8IZU3 236 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 NOC3LQ8WTT2 800 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 TSPAN18Q96SJ8 248 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 PYM1Q9BRP8 204 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 ZNF334Q9HCZ1 680 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 AVENQ9NQS1 362 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 SERTAD1Q9UHV2 236 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 FBXL21Q9UKT6 434 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 EXOC7Q9UPT5 735 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 PCDHB13Q9Y5F0 798 aa18.09■□□□□ 0.49
PDLIM7-201ENST00000355572 SHISA7A6NL88 538 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 CYB561D2O14569 222 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 ACTN4O43707 911 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 KLRC4O43908 158 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 EXTL3O43909 919 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 ITGB3P05106 788 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 POLR2BP30876 1174 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 AFMP43652 599 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 ME1P48163 572 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 TAF6P49848 677 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 TFAMQ00059 246 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 GPR17Q13304 367 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 POSTNQ15063 836 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 TANGO2Q6ICL3 276 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 CENPPQ6IPU0 288 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 RTL10Q7L3V2 364 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 STKLD1Q8NE28 680 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 OR5B17Q8NGF7 314 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 GZF1Q9H116 711 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 TMLHEQ9NVH6 421 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 RBAKQ9NYW8 714 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 WNT16Q9UBV4 365 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 KCNH3Q9ULD8 1083 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 ANAPC1Q9H1A4 1944 aa18.08■□□□□ 0.48
PDLIM7-201ENST00000355572 TULP1O00294 542 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 GALR2O43603 387 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 ODC1P11926 461 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 AOC1P19801 751 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 EPHA5P54756 1037 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 FAM26FQ5R3K3 315 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 STXBP5Q5T5C0 1151 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 ARMCX5Q6P1M9 558 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 USP37Q86T82 979 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 OSTM1Q86WC4 334 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 NELFCDQ8IXH7 590 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 GPD1LQ8N335 351 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 IQUBQ8NA54 791 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 SHKBP1Q8TBC3 707 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 ZNF507Q8TCN5 953 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 KCNG4Q8TDN1 519 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 LEO1Q8WVC0 666 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 SCFD1Q8WVM8 642 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 NXPE3Q969Y0 559 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 RSPRY1Q96DX4 576 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 MTMR12Q9C0I1 747 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 ZCWPW1Q9H0M4 648 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 MFSD1Q9H3U5 465 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 CUEDC2Q9H467 287 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 TBC1D17Q9HA65 648 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 SLC2A4RGQ9NR83 387 aa18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 ZFP37Q9Y6Q3 630 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 ZNF638Q14966 1978 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-201ENST00000355572 OR6C75A6NL08 312 aa18.06■□□□□ 0.48
PDLIM7-201ENST00000355572 CLIC2O15247 247 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms