RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RASSF2P50749 326 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 NEK3P51956 506 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 KHDC1Q4VXA5 237 aaKnown RBP9.91□□□□□ -0.82
SMG6-202ENST00000354901 ZNF564Q8TBZ8 553 aaPredicted RBP9.91□□□□□ -0.82
SMG6-202ENST00000354901 TAS1R2Q8TE23 839 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 ATG4AQ8WYN0 398 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.91□□□□□ -0.82
SMG6-202ENST00000354901 ZSWIM1Q9BR11 485 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 PAIP2BQ9ULR5 123 aaKnown RBP9.91□□□□□ -0.82
SMG6-202ENST00000354901 CTDP1Q9Y5B0 961 aaPredicted RBP9.91□□□□□ -0.82
SMG6-202ENST00000354901 TJP3O95049 919 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 PLS3P13797 630 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 VHLP40337 213 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 COG7P83436 770 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 BTKQ06187 659 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 TKFCQ3LXA3 575 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 ECHDC2Q86YB7 292 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 SRRM1Q8IYB3 904 aaKnown RBP9.91□□□□□ -0.82
SMG6-202ENST00000354901 CYP4X1Q8N118 509 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 SPOCK2Q92563 424 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 TLCD1Q96CP7 247 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 PITPNM3Q9BZ71 974 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 TMEM206Q9H813 350 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 LRCH1Q9Y2L9 728 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 ATAD5Q96QE3 1844 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 BOLA2-SMG1P6H3BVE0 249 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 PHF2O75151 1096 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 TMCC1O94876 653 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 UNC5CO95185 931 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 ACADSP16219 412 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 CHRNB2P17787 502 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 CAP2P40123 477 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 MMP13P45452 471 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 RTP1P59025 263 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 MRPS9P82933 396 aaKnown RBP9.91□□□□□ -0.82
SMG6-202ENST00000354901 DNAJC3Q13217 504 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 RASA3Q14644 834 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 SNRNP35Q16560 246 aaKnown RBP9.91□□□□□ -0.82
SMG6-202ENST00000354901 ZDHHC24Q6UX98 284 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 TAOK1Q7L7X3 1001 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 FAM151AQ8WW52 585 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 MCUR1Q96AQ8 359 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 SIKE1Q9BRV8 207 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 ZDHHC18Q9NUE0 388 aa9.91□□□□□ -0.82
SMG6-202ENST00000354901 ATRNL1Q5VV63 1379 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 SYNGAP1Q96PV0 1343 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 DENND3A2RUS2 1198 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 MAP3K7O43318 606 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 MAP7Q14244 749 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 CAPN12Q6ZSI9 719 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 POMGNT1Q8WZA1 660 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 LRRC37BQ96QE4 947 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 RIT2Q99578 217 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 TTC1Q99614 292 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 ASIC3Q9UHC3 531 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 DCTN4Q9UJW0 460 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 ZNF180Q9UJW8 692 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 SYNPO2Q9UMS6 1093 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 DHX15O43143 795 aaKnown RBP9.9□□□□□ -0.82
SMG6-202ENST00000354901 SPAG7O75391 227 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 STK10O94804 968 aaKnown RBP9.9□□□□□ -0.82
SMG6-202ENST00000354901 EIF3BP55884 814 aaKnown RBP9.9□□□□□ -0.82
SMG6-202ENST00000354901 RPS6P62753 249 aaKnown RBP9.9□□□□□ -0.82
SMG6-202ENST00000354901 KPNB1Q14974 876 aaKnown RBP9.9□□□□□ -0.82
SMG6-202ENST00000354901 SGSM1Q2NKQ1 1148 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMG6-202ENST00000354901 VPS52Q8N1B4 723 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 EIF1ADQ8N9N8 165 aaKnown RBP9.9□□□□□ -0.82
SMG6-202ENST00000354901 TRAPPC9Q96Q05 1148 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 SMC6Q96SB8 1091 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 HEMGNQ9BXL5 484 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 EPB41L4BQ9H329 900 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 PABPC3Q9H361 631 aaKnown RBP9.9□□□□□ -0.82
SMG6-202ENST00000354901 GRHL1Q9NZI5 618 aa9.9□□□□□ -0.82
SMG6-202ENST00000354901 MTRF1LQ9UGC7 380 aaKnown RBP9.9□□□□□ -0.82
SMG6-202ENST00000354901 OR6B1O95007 311 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 BRAFP15056 766 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 ADSSP30520 456 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 CPA2P48052 419 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 FMO1Q01740 532 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 MGAT5Q09328 741 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 PDE1CQ14123 709 aaPredicted RBP9.9□□□□□ -0.83
SMG6-202ENST00000354901 MAP7D1Q3KQU3 841 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 KCTD21Q4G0X4 260 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 ZFYVE27Q5T4F4 411 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 SPATA24Q86W54 205 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 C1orf131Q8NDD1 294 aaKnown RBP9.9□□□□□ -0.83
SMG6-202ENST00000354901 ZNF333Q96JL9 665 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 PWWP2AQ96N64 755 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 TUBGCP5Q96RT8 1024 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 NKIRAS1Q9NYS0 192 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 KCND2Q9NZV8 630 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 ANAPC7Q9UJX3 599 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 TELO2Q9Y4R8 837 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 WASF2Q9Y6W5 498 aa9.9□□□□□ -0.83
SMG6-202ENST00000354901 UBE4BO95155 1302 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 DYTNA2CJ06 578 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 WDR91A4D1P6 747 aa9.89□□□□□ -0.83
SMG6-202ENST00000354901 SPDYE16A6NNV3 312 aaPredicted RBP9.89□□□□□ -0.83
SMG6-202ENST00000354901 MIF4GDA9UHW6 222 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms