RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 SCARA3Q6AZY7 606 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 MTSS1LQ765P7 747 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 NSUN7Q8NE18 718 aaKnown RBP14.07□□□□□ -0.16
LMBR1-201ENST00000353442 MCEEQ96PE7 176 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 FAM167BQ9BTA0 163 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 TM6SF1Q9BZW5 370 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 EHD2Q9NZN4 543 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 NEDD4P46934 1319 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 RAG1P15918 1043 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 SV2CQ496J9 727 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 IZUMO3Q5VZ72 239 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 HLA-DQA1Q5Y7H0 255 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 CYP4X1Q8N118 509 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 TUBGCP3Q96CW5 907 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 MED8Q96G25 268 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 PKD2L2Q9NZM6 624 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 PP2D1A8MPX8 630 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 SERPINB3P29508 390 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 NME5P56597 212 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 VPS50Q96JG6 964 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 TGS1Q96RS0 853 aaKnown RBP14.07□□□□□ -0.16
LMBR1-201ENST00000353442 ITGB6P18564 788 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 PMS2P54278 862 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 ZBED6P86452 979 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 SGCGQ13326 291 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 SMTNL2Q2TAL5 461 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 CEP55Q53EZ4 464 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 PYCARDQ9ULZ3 195 aa14.07□□□□□ -0.16
LMBR1-201ENST00000353442 A8MX80 341 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 ANKRD65E5RJM6 399 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 MYO1CO00159 1063 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 GABPB1Q06547 395 aaPredicted RBP14.06□□□□□ -0.16
LMBR1-201ENST00000353442 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
LMBR1-201ENST00000353442 CATSPERBQ9H7T0 1116 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 TSPAN3O60637 253 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 CLASP2O75122 1294 aaKnown RBP14.06□□□□□ -0.16
LMBR1-201ENST00000353442 PMPCBO75439 489 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 WEE2P0C1S8 567 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 FGFR4P22455 802 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 MED15Q96RN5 788 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 PLA2G4CQ9UP65 541 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 PODXLO00592 558 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 ABCE1P61221 599 aaKnown RBP14.06□□□□□ -0.16
LMBR1-201ENST00000353442 POU4F1Q01851 419 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 GALNTL6Q49A17 601 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 CEP68Q76N32 757 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 TMC2Q8TDI7 906 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 RPRD1AQ96P16 312 aaPredicted RBP14.06□□□□□ -0.16
LMBR1-201ENST00000353442 CPA4Q9UI42 421 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 KCNQ2O43526 872 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 PARNO95453 639 aaKnown RBP14.06□□□□□ -0.16
LMBR1-201ENST00000353442 TDP2O95551 362 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 GMPSP49915 693 aaPredicted RBP14.06□□□□□ -0.16
LMBR1-201ENST00000353442 PCDHB12Q9Y5F1 795 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 SYNGAP1Q96PV0 1343 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 GYS1P13807 737 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 AP2B1P63010 937 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 BRINP3Q76B58 766 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 FAR2Q96K12 515 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 PCMTD2Q9NV79 361 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 SYBUQ9NX95 663 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 HDAC6Q9UBN7 1215 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 UTYO14607 1347 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 POU1F1P28069 291 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 NACC2Q96BF6 587 aa14.06□□□□□ -0.16
LMBR1-201ENST00000353442 ERN1O75460 977 aaKnown RBP14.05□□□□□ -0.16
LMBR1-201ENST00000353442 STIP1P31948 543 aaKnown RBP14.05□□□□□ -0.16
LMBR1-201ENST00000353442 RGS2P41220 211 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 CCR4P51679 360 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 SLC44A4Q53GD3 710 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 SSH3Q8TE77 659 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 SGF29Q96ES7 293 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 TRPC4Q9UBN4 977 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 MCAMP43121 646 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 UNC13DQ70J99 1090 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 B3GALNT2Q8NCR0 500 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 FRMD6Q96NE9 622 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 SENP7Q9BQF6 1050 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 STARD7Q9NQZ5 370 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 ZNF711Q9Y462 761 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 CLUP10909 449 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 GRK3P35626 688 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 GYS2P54840 703 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 CUL4AQ13619 759 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 INPP5AQ14642 412 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 TAF13Q15543 124 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 TRIM65Q6PJ69 517 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 GALNT4Q8N4A0 578 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 MTERF3Q96E29 417 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 PDZK1P1A8MUH7 402 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 E9PBE3 544 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 STRNO43815 780 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 SLC11A2P49281 568 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 ACSF2Q96CM8 615 aaPredicted RBP14.05□□□□□ -0.16
LMBR1-201ENST00000353442 C18orf8Q96DM3 657 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 SOHLH2Q9NX45 425 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 MAP3K1Q13233 1512 aa14.05□□□□□ -0.16
LMBR1-201ENST00000353442 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
LMBR1-201ENST00000353442 FGFR2P21802 821 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms