RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 DNAJB3Q8WWF6 145 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.21□□□□□ -0.61
PTPN2-203ENST00000353319 LENG1Q96BZ8 264 aaPredicted RBP11.21□□□□□ -0.61
PTPN2-203ENST00000353319 RNPC3Q96LT9 517 aaKnown RBP11.21□□□□□ -0.61
PTPN2-203ENST00000353319 ZIC5Q96T25 663 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 KRT12Q99456 494 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 MTG1Q9BT17 334 aaPredicted RBP11.21□□□□□ -0.61
PTPN2-203ENST00000353319 VIPAS39Q9H9C1 493 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 DPP3Q9NY33 737 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 SCINQ9Y6U3 715 aa11.21□□□□□ -0.61
PTPN2-203ENST00000353319 MYO1FO00160 1098 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 KIF3CO14782 793 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 SART1O43290 800 aaKnown RBP11.2□□□□□ -0.62
PTPN2-203ENST00000353319 CLSTN1O94985 981 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 NPTXRO95502 500 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 FGGP02679 453 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 CALB1P05937 261 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 CD58P19256 250 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 FGFR4P22455 802 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 RAD23BP54727 409 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 RNASE9P60153 205 aaKnown RBP11.2□□□□□ -0.62
PTPN2-203ENST00000353319 MAMLD1Q13495 774 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 PTPROQ16827 1216 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 XKR4Q5GH76 650 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 WDTC1Q8N5D0 677 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 C7orf31Q8N865 590 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 WHAMMQ8TF30 809 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 AENQ8WTP8 325 aaKnown RBP11.2□□□□□ -0.62
PTPN2-203ENST00000353319 KRT35Q92764 455 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 HPDLQ96IR7 371 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 SNX27Q96L92 541 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 OSMRQ99650 979 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 PARVAQ9NVD7 372 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 NXF1Q9UBU9 619 aaKnown RBP11.2□□□□□ -0.62
PTPN2-203ENST00000353319 CHORDC1Q9UHD1 332 aaPredicted RBP11.2□□□□□ -0.62
PTPN2-203ENST00000353319 ANAPC7Q9UJX3 599 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 KIAA1257Q9ULG3 409 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 POLIQ9UNA4 740 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 AGAP1Q9UPQ3 857 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 CITO14578 2027 aa11.2□□□□□ -0.62
PTPN2-203ENST00000353319 TCRBV5S1A1TA0A578 114 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SPDYE4A6NLX3 237 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SEPT4O43236 478 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SPOPO43791 374 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 CILPO75339 1184 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 ZMYND10O75800 440 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 PROSCO94903 275 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 GLI1P08151 1106 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 POLR2BP30876 1174 aaKnown RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 MAN1A1P33908 653 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 FLT3LGP49771 235 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 YARSP54577 528 aaKnown RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 RWDD2BP57060 319 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 ZNF200P98182 395 aaPredicted RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SLC7A5Q01650 507 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 TAP1Q03518 808 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 TMEM62Q0P6H9 643 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 INCA1Q0VD86 236 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 NOGQ13253 232 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 CASP8Q14790 479 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 GNASQ5JWF2 1037 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 EMBQ6PCB8 327 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 MAATS1Q7Z4T9 603 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 RPAINQ86UA6 219 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 CCDC26Q8TAB7 109 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 FEZF2Q8TBJ5 459 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 TFAP2BQ92481 460 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 TRIB2Q92519 343 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 KIF12Q96FN5 646 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 C11orf70Q9BRQ4 267 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 PLVAPQ9BX97 442 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SDCBP2Q9H190 292 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SPC25Q9HBM1 224 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 CNTN3Q9P232 1028 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 GABRQQ9UN88 632 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 CEP83Q9Y592 693 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 RALGAPA2Q2PPJ7 1873 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 TMEM191CA6NGB0 347 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 TMEM110-MUSTN1A8MSY1 372 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 RAD51CO43502 376 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 HEXIM1O94992 359 aaKnown RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 C6orf222P0C671 652 aaPredicted RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 MYBL2P10244 700 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 VDRP11473 427 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 BRD2P25440 801 aaKnown RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 EPHB4P54760 987 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 GSCP56915 257 aaPredicted RBP11.19□□□□□ -0.62
PTPN2-203ENST00000353319 NNTQ13423 1086 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 CNGA2Q16280 664 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 UBXN11Q5T124 520 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 MMS22LQ6ZRQ5 1243 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SESTD1Q86VW0 696 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 PASD1Q8IV76 773 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 LRRC52Q8N7C0 313 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SLC4A11Q8NBS3 891 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 BEST2Q8NFU1 509 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 TMEM40Q8WWA1 233 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 SEC14L1Q92503 715 aa11.19□□□□□ -0.62
PTPN2-203ENST00000353319 CAVIN3Q969G5 261 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms