RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 CNTNAP1P78357 1384 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 RPTORQ8N122 1335 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 CARNS1A5YM72 827 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 APOL1O14791 398 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 PAEPP09466 180 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 SLC7A5Q01650 507 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ROR1Q01973 937 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 USP38Q8NB14 1042 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 TAS1R2Q8TE23 839 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 CPA5Q8WXQ8 436 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 APBA2Q99767 749 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 NIFKQ9BYG3 293 aaKnown RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 XIRP1Q702N8 1843 aaKnown RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ASTN2O75129 1339 aaPredicted RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 A0A087WZ62 844 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 IQANK1A0A1B0GTG1 560 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 BTNL10A8MVZ5 291 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ODC1P11926 461 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 GNL1P36915 607 aaPredicted RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 SNX17Q15036 470 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 GPR142Q7Z601 462 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 SPATA2LQ8IUW3 424 aaPredicted RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ARHGAP18Q8N392 663 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 PYROXD1Q8WU10 500 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 HNRNPLLQ8WVV9 542 aaKnown RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 ABTB1Q969K4 478 aaPredicted RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 DDX50Q9BQ39 737 aaKnown RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 FDXACB1Q9BRP7 624 aaPredicted RBP12.82□□□□□ -0.36
SMAD9-201ENST00000350148 RSAD1Q9HA92 442 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 TTLL3Q9Y4R7 772 aa12.82□□□□□ -0.36
SMAD9-201ENST00000350148 PSMD3O43242 534 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 ITIH2P19823 946 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 FNTAP49354 379 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 TTC16Q8NEE8 873 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 RNF25Q96BH1 459 aaPredicted RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 AVENQ9NQS1 362 aaPredicted RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 SNX24Q9Y343 169 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 CREB3O43889 395 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 GPD1P21695 349 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 CLEC16AQ2KHT3 1053 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 LRIG3Q6UXM1 1119 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 ZNF446Q9NWS9 450 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 FAM170AA1A519 330 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 PPP1R12AO14974 1030 aaPredicted RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 KRT14P02533 472 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 NFKBIAP25963 317 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 ITKQ08881 620 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 BOLA3Q53S33 107 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 MIIPQ5JXC2 388 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 TREML2Q5T2D2 321 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 GJB7Q6PEY0 223 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 FAF2Q96CS3 445 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 PLEKHA5Q9HAU0 1116 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 BAZ2BQ9UIF8 2168 aaKnown RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 APOEP02649 317 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 PDGFRAP16234 1089 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 COMTP21964 271 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 COPS2P61201 443 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 BSPRYQ5W0U4 402 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 BTBD8Q5XKL5 378 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 ZNF571Q7Z3V5 609 aaPredicted RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 ELMOD1Q8N336 334 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 ZNF513Q8N8E2 541 aaPredicted RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 ACTRT1Q8TDG2 376 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 PPP4R1Q8TF05 950 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 MRRFQ96E11 262 aaKnown RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 EPAS1Q99814 870 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 ZSWIM1Q9BR11 485 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 FRMD8Q9BZ67 464 aaPredicted RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 MTMR12Q9C0I1 747 aa12.81□□□□□ -0.36
SMAD9-201ENST00000350148 DDX47Q9H0S4 455 aaKnown RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 INTS9Q9NV88 658 aaKnown RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 FAF1Q9UNN5 650 aaPredicted RBP12.81□□□□□ -0.36
SMAD9-201ENST00000350148 PPFIA2O75334 1257 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 SGPL1O95470 568 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 GLRA2P23416 452 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 MCL1Q07820 350 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 ARSHQ5FYA8 562 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 KIAA1755Q5JYT7 1200 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 GKAP1Q5VSY0 366 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 ARHGAP24Q8N264 748 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 PPTC7Q8NI37 304 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 DDX23Q9BUQ8 820 aaKnown RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 FAM124BQ9H5Z6 455 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 MYH7P12883 1935 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 FARP2O94887 1054 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 PBX1P40424 430 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 RASSF2P50749 326 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 ATP1A2P50993 1020 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 PMS2P54278 862 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 MRPS25P82663 173 aaKnown RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 ZNF211Q13398 564 aaPredicted RBP12.8□□□□□ -0.36
SMAD9-201ENST00000350148 LRRC43Q8N309 656 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 SLC30A5Q8TAD4 765 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 COG1Q8WTW3 980 aa12.8□□□□□ -0.36
SMAD9-201ENST00000350148 MTIF3Q9H2K0 278 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms