RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ZNF720Q7Z2F6 126 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 NET1Q7Z628 596 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 ADGRG6Q86SQ4 1221 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 FBXO11Q86XK2 927 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 SCYL3Q8IZE3 742 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 GMCL1P1Q8NEA9 526 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 GMCL1Q96IK5 515 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 OSBPL8Q9BZF1 889 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 GPAMQ9HCL2 828 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 NEU2Q9Y3R4 380 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 EXOC1LA0A1B0GW35 172 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 CFAP69A5D8W1 941 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 RSPH10B2B2RC85 870 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 MEIS1O00470 390 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 HNRNPRO43390 633 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 RNASEH1O60930 286 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 RSPH10BP0C881 870 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 FGFR1P11362 822 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 ETS2P15036 469 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 CA4P22748 312 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 CCNFP41002 786 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 BFSP1Q12934 665 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 PPP2R5CQ13362 524 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 PICALMQ13492 652 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 TRMT5Q32P41 509 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 CCDC62Q6P9F0 684 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 PHLDB2Q86SQ0 1253 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 C12orf56Q8IXR9 622 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 LRRC43Q8N309 656 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 MYCT1Q8N699 235 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 RFWD2Q8NHY2 731 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 C1orf54Q8WWF1 131 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 PHACTR1Q9C0D0 580 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 AGPAT3Q9NRZ7 376 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 HEY2Q9UBP5 337 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 ZNF232Q9UNY5 417 aa10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 MTO1Q9Y2Z2 717 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-202ENST00000348749 FAM86B1E9PN63 330 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 CLDN3O15551 220 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 SPOPO43791 374 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 RAD21O60216 631 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 NPM3O75607 178 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 FAM86B2P0C5J1 330 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 ESRRAP11474 423 aaPredicted RBP10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 AMPD1P23109 780 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 PGM1P36871 562 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 ADCY8P40145 1251 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 MAGEA4P43358 317 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 AP2B1P63010 937 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 CDK16Q00536 496 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 DEUP1Q05D60 604 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 TTLL12Q14166 644 aaPredicted RBP10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 PKN2Q16513 984 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 MAPK6Q16659 721 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 TRAPPC3LQ5T215 181 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 LVRNQ6Q4G3 990 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 ANKS1BQ7Z6G8 1248 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 PRUNE1Q86TP1 453 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 CCDC24Q8N4L8 307 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 LMO3Q8TAP4 145 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 PIP4K2CQ8TBX8 421 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 DDX27Q96GQ7 796 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 DYDC2Q96IM9 177 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 C9orf72Q96LT7 481 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 CATSPER2Q96P56 530 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 NACC1Q96RE7 527 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 STRA6Q9BX79 667 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 TRIM55Q9BYV6 548 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 DCLK3Q9C098 648 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 DDX4Q9NQI0 724 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 CHST7Q9NS84 486 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 NDE1Q9NXR1 346 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 UVRAGQ9P2Y5 699 aa10.89□□□□□ -0.67
CHRNA1-202ENST00000348749 A0A0J9YVX5 310 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 A6NJR5 290 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 BUD23O43709 281 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 TGDSO95455 350 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 CYP1A2P05177 515 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 ALDH1B1P30837 517 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 CENPCQ03188 943 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 TMCO4Q5TGY1 634 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 PRR5LQ6MZQ0 368 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 NOP9Q86U38 636 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 KIAA0825Q8IV33 1275 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 FAM178BQ8IXR5 827 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 ALDH16A1Q8IZ83 802 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 ZCCHC9Q8N567 271 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 CCDC110Q8TBZ0 833 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 SLC20A1Q8WUM9 679 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 DGCR14Q96DF8 476 aaKnown RBP10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 MPP4Q96JB8 637 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 MAML3Q96JK9 1138 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 PWWP2AQ96N64 755 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 GPR101Q96P66 508 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 FIZ1Q96SL8 496 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 MRIQ9BWK5 157 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 TMEM206Q9H813 350 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 CCNL1Q9UK58 526 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms