RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CAPN7Q9Y6W3 813 aa15.8■□□□□ 0.12
VIPAS39-202ENST00000343765 INO80B-WBP1J3KQ70 363 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 B4GALT5O43286 388 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 FAM189A1O60320 539 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 ITIH2P19823 946 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 MMP13P45452 471 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 MAPK6Q16659 721 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 GPAT2Q6NUI2 795 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 ZPBP2Q6X784 338 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 WDR49Q8IV35 697 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 ZBTB8OSQ8IWT0 167 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 MGARPQ8TDB4 240 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 SEC16BQ96JE7 1060 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 INO80BQ9C086 356 aaPredicted RBP15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 TMEM51Q9NW97 253 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 NXF1Q9UBU9 619 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 F8VP50 259 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 AGTP01019 485 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 KRT1P04264 644 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 MMP8P22894 467 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 ORC1Q13415 861 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 ERMARDQ5T6L9 678 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 FBXW10Q5XX13 1052 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 DNAJC24Q6P3W2 148 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 DCUN1D2Q6PH85 259 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 SPATS2Q86XZ4 545 aaKnown RBP15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 KATNAL2Q8IYT4 538 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 FAM129AQ9BZQ8 928 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 ASCC2Q9H1I8 757 aaPredicted RBP15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 CNTN6Q9UQ52 1028 aa15.79■□□□□ 0.12
VIPAS39-202ENST00000343765 SRRM3A6NNA2 597 aaPredicted RBP15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 OGTO15294 1046 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 ATP2C2O75185 946 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 CSDE1O75534 798 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 TMEM191BP0C7N4 346 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 MAN1A1P33908 653 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 RAP1GAPP47736 663 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 ZNF132P52740 706 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 EFNA5P52803 228 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 DUOXA2Q1HG44 320 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 ZNF699Q32M78 642 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 RHBDF2Q6PJF5 856 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 TRMT10CQ7L0Y3 403 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 KAT2BQ92831 832 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 CABS1Q96KC9 395 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 SPATA33Q96N06 139 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 GPR20Q99678 358 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 PRMT1Q99873 361 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 NIF3L1Q9GZT8 377 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 TXNRD2Q9NNW7 524 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 INTS9Q9NV88 658 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 IVNS1ABPQ9Y6Y0 642 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 WDR90Q96KV7 1748 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 KRT19P08727 400 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 DRD4P21917 467 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 CLCN3P51790 818 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 ZNF252P-AS1Q0IIN9 211 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 NFX1Q12986 1120 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 LRRC14Q15048 493 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 IER5Q5VY09 327 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 TXNRD3NBQ6F5E7 133 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 IPO4Q8TEX9 1081 aaKnown RBP15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 TFAP2BQ92481 460 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 CHMP6Q96FZ7 201 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 VCPIP1Q96JH7 1222 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 IP6K2Q9UHH9 426 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 POLIQ9UNA4 740 aa15.78■□□□□ 0.12
VIPAS39-202ENST00000343765 ZBTB42B2RXF5 422 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 H0YHG0 523 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 CREB1P16220 341 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 IGBP1P78318 339 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 OGDHQ02218 1023 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 ZNF568Q3ZCX4 644 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 IZUMO3Q5VZ72 239 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 MFSD7Q6UXD7 560 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 SULF1Q8IWU6 871 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 CACNA2D3Q8IZS8 1091 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 EXD1Q8NHP7 514 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 ATXN2LQ8WWM7 1075 aaKnown RBP15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 TRAIPQ9BWF2 469 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 MLXIPLQ9NP71 852 aa15.77■□□□□ 0.12
VIPAS39-202ENST00000343765 GOLGA8SH3BPF8 625 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 ZSCAN5DPP0CG00 497 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 CD19P15391 556 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 CCNG2Q16589 344 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 GKAP1Q5VSY0 366 aaPredicted RBP15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 EEF1DP3Q658K8 133 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 TMEM192Q8IY95 271 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 GLIS1Q8NBF1 620 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 FAM167AQ96KS9 214 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 C9orf72Q96LT7 481 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 TBK1Q9UHD2 729 aa15.77■□□□□ 0.11
VIPAS39-202ENST00000343765 TMEM191CA6NGB0 347 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 CNMDO75829 334 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 TGFB3P10600 412 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 PSMC4P43686 418 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 TTLL12Q14166 644 aaPredicted RBP15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 PLCB4Q15147 1175 aa15.76■□□□□ 0.11
VIPAS39-202ENST00000343765 Q3C1V9 767 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms