RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 TRIM11Q96F44 468 aa25.44■■□□□ 1.66
NELFB-201ENST00000343053 FAM81BQ96LP2 452 aa25.44■■□□□ 1.66
NELFB-201ENST00000343053 PITPNM3Q9BZ71 974 aa25.44■■□□□ 1.66
NELFB-201ENST00000343053 PSTPIP1O43586 416 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 NOP14P78316 857 aaKnown RBP25.43■■□□□ 1.66
NELFB-201ENST00000343053 GAD2Q05329 585 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 BNIP1Q12981 228 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 PKN2Q16513 984 aaKnown RBP25.43■■□□□ 1.66
NELFB-201ENST00000343053 GALNTL6Q49A17 601 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 ANKMY2Q8IV38 441 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 ASAP3Q8TDY4 903 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 LPAR1Q92633 364 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 PLSCR1O15162 318 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 KRT15P19012 456 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 PLCB3Q01970 1234 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 STRN3Q13033 797 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 EMC2Q15006 297 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 PRAMEF18Q5VWM3 479 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 TACO1Q9BSH4 297 aaKnown RBP25.43■■□□□ 1.66
NELFB-201ENST00000343053 KIAA1683Q9H0B3 1180 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 FBXO40Q9UH90 709 aa25.43■■□□□ 1.66
NELFB-201ENST00000343053 TTLL13PA6NNM8 815 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 GCAP28676 217 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 CAV1Q03135 178 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 PSMD6Q15008 389 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 KATNAL2Q8IYT4 538 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 MCPH1Q8NEM0 835 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 TMEM121Q9BTD3 319 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 BRD2P25440 801 aaKnown RBP25.42■■□□□ 1.66
NELFB-201ENST00000343053 ZNF252P-AS1Q0IIN9 211 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 CYP4A22Q5TCH4 519 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 ZBED8Q8IZ13 594 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 MAGEB18Q96M61 343 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 CCDC77Q9BR77 488 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 MSTO1Q9BUK6 570 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 KLHL14Q9P2G3 628 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 GRID1Q9ULK0 1009 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 PSME4Q14997 1843 aa25.42■■□□□ 1.66
NELFB-201ENST00000343053 CFAP73A6NFT4 308 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 LIASO43766 372 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 PEX10O60683 326 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 PSAPP07602 524 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 CDC25CP30307 473 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 GBP2P32456 591 aaPredicted RBP25.41■■□□□ 1.66
NELFB-201ENST00000343053 SCARA5Q6ZMJ2 495 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 TMEM237Q96Q45 408 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 SLC9A2Q9UBY0 812 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 LGALS13Q9UHV8 139 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 ZC3H11AO75152 810 aaKnown RBP eCLIP25.41■■□□□ 1.669e-6■■■■□ 23.7
NELFB-201ENST00000343053 OGDHQ02218 1023 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 CXCL9Q07325 125 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 SMTNL2Q2TAL5 461 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
NELFB-201ENST00000343053 ZNF677Q86XU0 584 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 MRPL47Q9HD33 250 aaKnown RBP25.41■■□□□ 1.66
NELFB-201ENST00000343053 PRKAG3Q9UGI9 489 aa25.41■■□□□ 1.66
NELFB-201ENST00000343053 FAM47DPA6NHR8 397 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 BPIFB4P59827 614 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 GHRHRQ02643 423 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 PTP4A2Q12974 167 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 EFTUD2Q15029 972 aaKnown RBP eCLIP25.4■■□□□ 1.661e-8■■■■■ 34.6
NELFB-201ENST00000343053 ZBTB33Q86T24 672 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 ZCCHC9Q8N567 271 aaKnown RBP25.4■■□□□ 1.66
NELFB-201ENST00000343053 EXD1Q8NHP7 514 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 FEZF2Q8TBJ5 459 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 SLITRK1Q96PX8 696 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 RXFP1Q9HBX9 757 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 KIAA1586Q9HCI6 787 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 MYOZ2Q9NPC6 264 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 PDLIM7Q9NR12 457 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 COL11A1P12107 1806 aaPredicted RBP25.4■■□□□ 1.66
NELFB-201ENST00000343053 LRRD1A4D1F6 860 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 TNFSF9P41273 254 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 SP2Q02086 613 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 STAT4Q14765 748 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 PLEKHA7Q6IQ23 1121 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 TTLL6Q8N841 843 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 NSMCE1Q8WV22 266 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 MAML1Q92585 1016 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 SENP7Q9BQF6 1050 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 C12orf65Q9H3J6 166 aaKnown RBP25.4■■□□□ 1.66
NELFB-201ENST00000343053 FSTL1Q12841 308 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 MTFR1Q15390 333 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 ZNF606Q8WXB4 792 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 TRABDQ9H4I3 376 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 EURLQ9NYK6 297 aa25.4■■□□□ 1.66
NELFB-201ENST00000343053 A0A1W2PPM1 405 aa25.39■■□□□ 1.66
NELFB-201ENST00000343053 SGK1O00141 431 aa25.39■■□□□ 1.66
NELFB-201ENST00000343053 ANP32DO95626 131 aa25.39■■□□□ 1.66
NELFB-201ENST00000343053 CST3P01034 146 aaPredicted RBP25.39■■□□□ 1.66
NELFB-201ENST00000343053 RPA3P35244 121 aaPredicted RBP25.39■■□□□ 1.66
NELFB-201ENST00000343053 DEPTORQ8TB45 409 aa25.39■■□□□ 1.66
NELFB-201ENST00000343053 MYLK2Q9H1R3 596 aa25.39■■□□□ 1.66
NELFB-201ENST00000343053 C17orf75Q9HAS0 396 aa25.39■■□□□ 1.66
NELFB-201ENST00000343053 ETNK1Q9HBU6 452 aa25.39■■□□□ 1.66
NELFB-201ENST00000343053 K7ERI5 159 aa25.39■■□□□ 1.65
NELFB-201ENST00000343053 GLRA2P23416 452 aa25.39■■□□□ 1.65
NELFB-201ENST00000343053 IL9RQ01113 521 aa25.39■■□□□ 1.65
NELFB-201ENST00000343053 DCUN1D2Q6PH85 259 aa25.39■■□□□ 1.65
NELFB-201ENST00000343053 TRABD2AQ86V40 505 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms